ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2159_curated_2

Organism: scnpilot_dereplicated_Thiobacillus_5

near complete RP 51 / 55 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 3925..4557

Top 3 Functional Annotations

Value Algorithm Source
LuxR family transcriptional regulator id=12494857 bin=THIO_HI species=Burkholderia sp. genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 80.1
  • Coverage: 211.0
  • Bit_score: 334
  • Evalue 7.80e-89
RESPONSE REGULATOR, LuxR family, similar to vsrD similarity KEGG
DB: KEGG
  • Identity: 58.6
  • Coverage: 210.0
  • Bit_score: 231
  • Evalue 2.20e-58
Tax=GWA2_Gallionellales_54_124_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 65.9
  • Coverage: 211.0
  • Bit_score: 269
  • Evalue 5.70e-69

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA2_Gallionellales_54_124_curated → Gallionellales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 633
ATGACCAGAATCATCATCGTCGACGACCATGCCATCGTGCGTCACGGACTCAAGCAGATCCTCGCGCTTGCGCCGGATCTCGCTGTCGCCGGTGAGGCCGCCAGTGGCGAGGAACTCCGGACGGTACTCGCGCGGGTCGAGTGCGATCTCGTGCTTCTGGATATGAACATGCCGGGGCTGGCGGGCGTCGATCTGATCAAGTGGATTCACGACGCATATCCGCGAGTCGCGATTCTGGTGTTGAGCATGCATGCCGAGGGGCAGATTGCCAGCCGCGCACTCAAGGCGGGTGCGCGCGGCTATCTGACCAAGGACAGCGAGCCGGAAATCCTGATCGGCGCCATCCGCAAGGTCGCGCATGGCGGCAAGTTCATCGATGCGGCGCTGGTCGAAACACTCGTGTTCGATCACGATCCGGCTGGCAGCGCGCCGCACGAATCCCTGTCCGAACGGGAGCTTCAGGTCTTTCTGCTGTTCGCTTCGGGCAAGACGGTCAGCGAGATTGCGAATGAGCTGTTCCTCAGCATCAAGACCGTCAGCACGCACAAGTTCCGTCTCATGCGGAAGATGAATTTCCAGACATCGACCGACCTGGTTCGCTACGCCATCCGTCATCGATTGATCGACGGCTGA
PROTEIN sequence
Length: 211
MTRIIIVDDHAIVRHGLKQILALAPDLAVAGEAASGEELRTVLARVECDLVLLDMNMPGLAGVDLIKWIHDAYPRVAILVLSMHAEGQIASRALKAGARGYLTKDSEPEILIGAIRKVAHGGKFIDAALVETLVFDHDPAGSAPHESLSERELQVFLLFASGKTVSEIANELFLSIKTVSTHKFRLMRKMNFQTSTDLVRYAIRHRLIDG*