ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2033_curated_7

Organism: scnpilot_dereplicated_Thiobacillus_5

near complete RP 51 / 55 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 6878..7237

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L20 n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=RL20_THIDA similarity UNIREF
DB: UNIREF100
  • Identity: 95.8
  • Coverage: 119.0
  • Bit_score: 225
  • Evalue 3.80e-56
rplT; 50S ribosomal protein L20; K02887 large subunit ribosomal protein L20 similarity KEGG
DB: KEGG
  • Identity: 95.8
  • Coverage: 119.0
  • Bit_score: 225
  • Evalue 1.20e-56
50S ribosomal protein L20 {ECO:0000255|HAMAP-Rule:MF_00382}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.8
  • Coverage: 119.0
  • Bit_score: 225
  • Evalue 5.30e-56

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 360
ATGCCACGCGTCAAACGGGGCGTAACCGCCCGCGCCAGCCACAAGAAGATTCTCGACGCCGCCAAGGGCTACCGGGGTCGTCGCAAGAACGTATTCCGCGTCGCCAACGAAGCGGTGATGAAAGCGGGGCAATATGCCTATCGCGACCGCCGTCAGCGCAAGCGTCAGTTCCGCGCGCTGTGGATTGCCCGTATCAACGCGGCCGCCCGCCAGCACGGCCTGACCTATAGCGTGTTCATGAACGGCCTCAACCGTGCCGAGATCGAACTGGACCGCAAGGTGTTGTCCGACATCGCGATCTTCGACAAGGATGCCTTCGCCAGGATCGTCGATCAGGTCAAGGCCAAGCTCGCCGCGTAA
PROTEIN sequence
Length: 120
MPRVKRGVTARASHKKILDAAKGYRGRRKNVFRVANEAVMKAGQYAYRDRRQRKRQFRALWIARINAAARQHGLTYSVFMNGLNRAEIELDRKVLSDIAIFDKDAFARIVDQVKAKLAA*