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SCNpilot_expt_1000_bf_scaffold_1014_curated_16

Organism: scnpilot_dereplicated_Thiobacillus_5

near complete RP 51 / 55 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(14376..14918)

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase E (EC:5.4.99.-); K06181 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] similarity KEGG
DB: KEGG
  • Identity: 87.8
  • Coverage: 180.0
  • Bit_score: 333
  • Evalue 3.60e-89
Pseudouridine synthase id=1324813 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb similarity UNIREF
DB: UNIREF100
  • Identity: 86.2
  • Coverage: 181.0
  • Bit_score: 334
  • Evalue 8.80e-89
Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 86.2
  • Coverage: 181.0
  • Bit_score: 334
  • Evalue 1.20e-88

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Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 543
GTGGCGCGATTGGTCCTGTTCAACAAACCCTGGGGCGTGCTCTCCCAGTTCACCCCCGAGGGGCGCTGGCAGGGTCTGCGCGACCATCTCGACGTGCCCGGCGTGTATGCCGCCGGCCGTCTGGACGCCGACAGCGAAGGACTGCTGATTTTAACCGATGACGGCGCGCTACAGGCCCGCATTGCCGATCCGCGCCACAAGCTGCCCAAAACCTACTGGGCACAGGTCGAGGGCGCGCCGACCGACGCCGACCTCGAACCCCTGCGCCGTGGCGTCGACCTCGGCGATTTCGTCACCCGTCCGGCGCAAGTGCGCATCATCGACGAACCGGCGGGCCTGTGGCCGCGCCATCCGCCGATCCGCTTTCGCGCGCGCATTCCCACCACCTGGATCGAACTGGTGATCCACGAAGGCAAGAACCGCCAGGTGCGGCGCATGACGGCGAAAATCGGCTTTCCCACGCTGCGTCTCGTGCGCGCTGCGGTCGGCGAATGGCGACTGGGCGGACTGAAGCCTGGAGAATGGAAGGAACTGCATGTCTGA
PROTEIN sequence
Length: 181
VARLVLFNKPWGVLSQFTPEGRWQGLRDHLDVPGVYAAGRLDADSEGLLILTDDGALQARIADPRHKLPKTYWAQVEGAPTDADLEPLRRGVDLGDFVTRPAQVRIIDEPAGLWPRHPPIRFRARIPTTWIELVIHEGKNRQVRRMTAKIGFPTLRLVRAAVGEWRLGGLKPGEWKELHV*