name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_1014_curated_1
unknown
|
Not on your lists |
374..712
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_1014_curated_2
unknown
|
Not on your lists |
709..1359
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_1014_curated_3
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1625..1906
|
Putative uncharacterized protein n=2 Tax=Thiomonas RepID=D5X0B2_THIK1
putative Methionine repressor-like
Putative Methionine repressor-like {ECO:0000313|EMBL:CAZ88178.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1014_curated_4
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1903..2400
|
N-acetyltransferase GCN5 n=1 Tax=Xanthomonas axonopodis RepID=UPI0002F08C4E
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ADG30557.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1014_curated_5
unknown
|
Not on your lists |
2760..3410
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_1014_curated_6
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3582..5273)
|
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00126}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
glutaminyl-tRNA synthetase n=1 Tax=Thiobacillus denitrificans RepID=UPI000365052D
|
|
SCNpilot_expt_1000_bf_scaffold_1014_curated_7
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5325..5711)
|
PilT protein domain protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UQX2_9RHIZ
hypothetical protein
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
|
|
SCNpilot_expt_1000_bf_scaffold_1014_curated_8
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5711..5953)
|
Prevent-host-death family protein id=3584052 bin=GWC2_Methylomirabilis_70_24 species=Burkholderia sp. genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
prevent-host-death family protein
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
|
|
SCNpilot_expt_1000_bf_scaffold_1014_curated_9
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6780..7856)
|
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61); K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-]
tRNA-specific 2-thiouridylase MnmA {ECO:0000255|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000255|HAMAP-Rule:MF_00144};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=MNMA_THIDA
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1014_curated_10
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7861..8247)
|
PilT protein domain protein n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IRG8_9GAMM
pilT; pilus retraction motor protein PilT
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1014_curated_11
Azotobacter chroococcum, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8244..8489)
|
Antitoxin of a toxin/antitoxin system protein n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IRG7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AJE22456.1}; TaxID=1328314 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="Azotobacter chroococcum NCIMB 8003.;"
antitoxin of a toxin/antitoxin system, phd-like
|
|
SCNpilot_expt_1000_bf_scaffold_1014_curated_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9264..12950)
|
hypothetical protein id=12495569 bin=THIO_HI species=Nevskia ramosa genus=Nevskia taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:EIL95029.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1014_curated_13
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12954..13367)
|
PilT protein domain protein n=1 Tax=Thiocapsa marina 5811 RepID=F9UIW8_9GAMM
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1014_curated_14
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13369..13596)
|
Prevent-host-death family protein n=1 Tax=Thiocapsa marina 5811 RepID=F9UIW9_9GAMM
Prevent-host-death family protein
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1014_curated_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13928..14383)
|
Putative hydrolase id=1324814 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
putative hydrolase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1014_curated_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14376..14918)
|
ribosomal large subunit pseudouridine synthase E (EC:5.4.99.-); K06181 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
Pseudouridine synthase id=1324813 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1014_curated_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14986..16242
|
isocitrate dehydrogenase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003740B5C
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1014_curated_18
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16352..17224)
|
hypothetical protein id=12497645 bin=THIO_MID species=Herminiimonas arsenicoxydans genus=Herminiimonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAL62248.1}; TaxID=204773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herminiimonas.;" source="Herminiimonas arsenicoxydans.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1014_curated_19
unknown
|
Not on your lists |
comp(17215..17400)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_1014_curated_20
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17769..19112)
|
gdhA; glutamate dehydrogenase (EC:1.4.1.4); K00262 glutamate dehydrogenase (NADP+) [EC:1.4.1.4] id=12495172 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185, ECO:0000313|EMBL:AJE98305.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
gdhA; glutamate dehydrogenase
|
|
SCNpilot_expt_1000_bf_scaffold_1014_curated_21
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19527..20435)
|
LysR family transcriptional regulator n=1 Tax=Azoarcus toluclasticus RepID=UPI0003666937
LysR family transcriptional regulator
Putative transcription regulator protein, lysR family {ECO:0000313|EMBL:CAI06866.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1014_curated_22
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20570..20932
|
GreA/GreB family elongation factor n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K6R1_NITWC
GreA/GreB family elongation factor; K06140 regulator of nucleoside diphosphate kinase
GreA/GreB family elongation factor {ECO:0000313|EMBL:ADJ28588.1}; TaxID=105559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus watsoni (strain C-113).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1014_curated_23
unknown
|
Not on your lists |
21040..21564
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_1014_curated_24
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21646..21852)
|
cold-shock protein n=1 Tax=Thiobacillus RepID=UPI000363017B
cold-shock DNA-binding protein family protein; K03704 cold shock protein (beta-ribbon, CspA family)
Possible Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:AAZ96808.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1014_curated_25
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22124..23269
|
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037E5BF1
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1014_curated_26
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23318..23878
|
Elongation factor P n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=EFP_THIDA
rbh
elongation factor P; K02356 elongation factor P
Elongation factor P {ECO:0000255|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000255|HAMAP-Rule:MF_00141};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1014_curated_27
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24123..27569
|
DNA polymerase III, alpha subunit id=1324808 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1014_curated_28
unknown
|
Not on your lists |
27894..28016
|
This feature has no annotations |