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SCNpilot_expt_1000_bf_scaffold_1014_curated_20

Organism: scnpilot_dereplicated_Thiobacillus_5

near complete RP 51 / 55 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(17769..19112)

Top 3 Functional Annotations

Value Algorithm Source
gdhA; glutamate dehydrogenase (EC:1.4.1.4); K00262 glutamate dehydrogenase (NADP+) [EC:1.4.1.4] id=12495172 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 89.1
  • Coverage: 448.0
  • Bit_score: 828
  • Evalue 3.70e-237
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185, ECO:0000313|EMBL:AJE98305.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.0
  • Coverage: 447.0
  • Bit_score: 763
  • Evalue 1.60e-217
gdhA; glutamate dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 78.7
  • Coverage: 447.0
  • Bit_score: 733
  • Evalue 5.00e-209

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Taxonomy

Pandoraea apista → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1344
ATGAAATACCAGAACCCCGACGAATTCCTTCGCCGTGCTGCCGAACACAACCCCGGGCAGCCCGAATACCTGCAGGCCGTCACCGAAGTCGTGGAAAGCCTGTGGCCGTTCATCACGGAGCATCCCAGGTATGCCGAGCACGGCCTCCTCGACCGCCTGATCGAGCCGGAGCGGATCGTGATTTTTCGGGTCTCCTGGGTCAACGATCATGGTGAGGTGCAGGTCAACCGCGGCTATCGCATCCAGCACAGCATGGCCATCGGTCCCTACAAGGGCGGCATCCGGTTCCATCCTTCCGTCAACCTGTCCATCCTCAAATTCCTCGCCTTCGAGCAGACCTTCAAGAACGCCCTGACCACGCTGCCCATGGGCGGCGGCAAGGGCGGGTCGGATTTCGATCCCAAGGGCAAGTCGCCGGGTGAAGTCATGCGCTTCTGCCAGGCCTTCATCACCGAATTGCATCGCCACATCGGCCCCGACACCGACGTGCCGGCCGGCGATATCGGCGTCGGTGCGCGCGAGGTCGGCTTCATGGCCGGCATGGTGAAGAAGCTGACCAACCGCTCCGATTGCGTGTTCACCGGCAAGGGGCTGAGCTACGGCGGCTCGCTCGTGCGCCCGGAAGCCACAGGCTACGGCCTGGTGTACTTCGTCGACGAAATGCTCAAGCATACCGGCCGCTCGATGGAGAACCTGCGGGTCGGCGTGTCGGGCTCGGGGAACGTGGCCCAGTACGCCATTGAAAAGGCCATCGCCCTGGGTGCGAAGGTCGTCACCGTATCGGACTCGAGCGGCACGGTGGTGGACAACGCCGGCTTCACCCCGGAAAAGCTCGCCGAACTGATGGAAGTCAAGAACCACCTGCACGGCCGCGTCAGCGACTATGCGCAGCGCGTCGGCGCCGAGTTCCATTCCGGCGTGCGCCCCTGGAGCGTACCCATGGACGTGGCGCTGCCGTGTGCCACGCAGAACGAACTCACCGGAGACGATGCCGCCATGCTGATCAGAAACGGTCTGCTCGCCGTGGGTGAAGGTGCCAACATGCCCTCGACCGCGGATGCCGCCAAGCTGTTCGACAAGCACCGCATCCTGTACGCCCCCAGCAAGGCCGGCAATGCCGGCGGCGTGGCCACCTCGGGCCTGGAAATGAGCCAGAACGCCATGCGTATTTCCTGGCCGCGGGAAGAAGTCGACGCCCGGCTGCTCGGCATCATGCAGGGCATCCACCGTGCCTGTCTCGAGTACGGCCGGCGCGAAGACGGCAGTGTCAGCTACGTCAACGGCGCCAACCTCGCCGGCTTCGTCAAGGTGGCGGACGCCATGCTGGCACAGGGCGTGATCTGA
PROTEIN sequence
Length: 448
MKYQNPDEFLRRAAEHNPGQPEYLQAVTEVVESLWPFITEHPRYAEHGLLDRLIEPERIVIFRVSWVNDHGEVQVNRGYRIQHSMAIGPYKGGIRFHPSVNLSILKFLAFEQTFKNALTTLPMGGGKGGSDFDPKGKSPGEVMRFCQAFITELHRHIGPDTDVPAGDIGVGAREVGFMAGMVKKLTNRSDCVFTGKGLSYGGSLVRPEATGYGLVYFVDEMLKHTGRSMENLRVGVSGSGNVAQYAIEKAIALGAKVVTVSDSSGTVVDNAGFTPEKLAELMEVKNHLHGRVSDYAQRVGAEFHSGVRPWSVPMDVALPCATQNELTGDDAAMLIRNGLLAVGEGANMPSTADAAKLFDKHRILYAPSKAGNAGGVATSGLEMSQNAMRISWPREEVDARLLGIMQGIHRACLEYGRREDGSVSYVNGANLAGFVKVADAMLAQGVI*