ggKbase home page

SCNpilot_expt_1000_bf_scaffold_478_curated_11

Organism: scnpilot_dereplicated_Thiobacillus_5

near complete RP 51 / 55 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 8338..9150

Top 3 Functional Annotations

Value Algorithm Source
DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase (EC:3.2.2.23 4.2.99.18); K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] similarity KEGG
DB: KEGG
  • Identity: 74.4
  • Coverage: 270.0
  • Bit_score: 401
  • Evalue 2.70e-109
Formamidopyrimidine-DNA glycosylase id=1308450 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb similarity UNIREF
DB: UNIREF100
  • Identity: 77.1
  • Coverage: 271.0
  • Bit_score: 425
  • Evalue 3.30e-116
Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 77.1
  • Coverage: 271.0
  • Bit_score: 425
  • Evalue 4.60e-116

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 813
ATGCCCGAACTGCCCGAAGTCGAGACGACGCGTCTCGGCCTGCTTCCCCGTTTGCCTGGCCACGCGCTCACCACGGTGACGGTGCACAATCCGCGCCTGCGCTGGCCGGTGCCGGACGAGCTGGCGGCGCGGCTGGTGGGGCGCACGCTGGCAGGGATCGCACGGCGGGGCAAATATCTGTTGTTCGACTTCAGCGGCATCACCCAGATCGTGCATCTGGGCATGTCAGGCAGCCTGCGTCTGGCAGCGCCGGACGAGCCGCCGGCGGCGCACGATCACGTCGACTGGCGCTTCGACGACGGTATCTGCCTGCGCCTGCGCGACCCGCGCCGATTCGGCGCGGTGCTGCTCACCGACGATCCCGGGCGGCATCCGCTGCTGGCGCATCTCGGGCCCGAGCCGCTGGGACCGGACTTCGACGCCGCCTGGCTCCACGCACGCTGCCGCGGACGCAACACGGCGATCAAGCCGCTCATCATGGACGCTTCGGTGGTGGTGGGTGTAGGCAACATCTACGCTTCCGAATCGCTGTTCCATGCCGGCATTCGCCCCACCACGGCGGCGCGACGTCTCAGCGGACCCGCCTGCGCGCGGCTGGTCGCGGCGATCCGCAAGGTGCTGGCGGCGGCGATCGCCGCGGGCGGCAGTTCGCTGCGTGATTACGTGACCAGCGAGGGCGCGCCGGGCCATTTCCAGCTGCACACCCGGGTGTACGGGCGCGAAGGCCTGCCCTGCCGGACGTGCGGGACAGCGATCCGGCGCATCGTGCAGGGGCAGCGCGCGAGCTTCTATTGCCCGACCTGCCAGCGCTGA
PROTEIN sequence
Length: 271
MPELPEVETTRLGLLPRLPGHALTTVTVHNPRLRWPVPDELAARLVGRTLAGIARRGKYLLFDFSGITQIVHLGMSGSLRLAAPDEPPAAHDHVDWRFDDGICLRLRDPRRFGAVLLTDDPGRHPLLAHLGPEPLGPDFDAAWLHARCRGRNTAIKPLIMDASVVVGVGNIYASESLFHAGIRPTTAARRLSGPACARLVAAIRKVLAAAIAAGGSSLRDYVTSEGAPGHFQLHTRVYGREGLPCRTCGTAIRRIVQGQRASFYCPTCQR*