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SCNpilot_cont_300_bf_scaffold_1543_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1543_curated_1
Pandoraea pulmonicola, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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98..388
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002375A92
3-keto-5-aminohexanoate cleavage protein {ECO:0000313|EMBL:AJC22895.1}; TaxID=93221 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pulmonicola.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1543_curated_2
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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926..1918
DNA (993bp) protein (331aa)
Alpha/beta hydrolase fold-3 domain protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6VBH6_VARPE
Variovorax paradoxus strain MEDvA23 contig_69, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ25344.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
alpha/beta hydrolase folD-3 domain-containing protein
SCNpilot_cont_300_bf_scaffold_1543_curated_3
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1926..3035
DNA (1110bp) protein (370aa)
NAD/factor-dependent formaldehyde dehydrogenase (EC:1.2.1.66); K00055 aryl-alcohol dehydrogenase [EC:1.1.1.90]
Aryl-alcohol dehydrogenase n=1 Tax=Klebsiella oxytoca M5al RepID=K6K7X6_KLEOX
Benzyl alcohol dehydrogenase {ECO:0000313|EMBL:EJZ33922.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
SCNpilot_cont_300_bf_scaffold_1543_curated_4
Mycobacterium parascrofulaceum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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3084..4475
DNA (1392bp) protein (464aa)
Uncharacterized protein (Fragment) n=1 Tax=Mycobacterium parascrofulaceum ATCC BAA-614 RepID=D5PCF9_9MYCO
Uncharacterized protein {ECO:0000313|EMBL:EFG76213.1}; Flags: Fragment;; TaxID=525368 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium parascrofulaceum ATCC BAA-614.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1543_curated_5
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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4472..5344
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Streptomyces sp. 351MFTsu5.1 RepID=UPI00036EE557
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ABQ24311.1}; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
SCNpilot_cont_300_bf_scaffold_1543_curated_6

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5522..6274
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI00036D9D8A
Uncharacterized protein {ECO:0000313|EMBL:KKN86700.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
dehydrogenase
SCNpilot_cont_300_bf_scaffold_1543_curated_7
Alcanivorax pacificus, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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6382..7812
DNA (1431bp) protein (477aa)
Monooxygenase n=1 Tax=Alcanivorax pacificus W11-5 RepID=K2GRF0_9GAMM
Monooxygenase {ECO:0000313|EMBL:AJD49468.1}; TaxID=391936 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax pacificus W11-5.;"
monooxygenase rbh
SCNpilot_cont_300_bf_scaffold_1543_curated_8
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7822..9315
DNA (1494bp) protein (498aa)
betB; Betaine aldehyde dehydrogenase (BADH) (EC:1.2.1.8)
Betaine aldehyde dehydrogenase (BADH) n=1 Tax=Ralstonia syzygii R24 RepID=G3AAI1_9RALS
Tax=BJP_08E140C01_Burkholderiales_65_30
SCNpilot_cont_300_bf_scaffold_1543_curated_9
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9343..10281)
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Serratia sp. ATCC 39006 RepID=V3T4W6_9ENTR
LysR family transcriptional regulator {ECO:0000313|EMBL:KGY25492.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;"
LysR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1543_curated_10
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10359..11336
DNA (978bp) protein (326aa)
Extra-cytoplasmic solute receptor family protein 171 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HLK4_ACHXA
extra-cytoplasmic solute receptor family protein 171
Extra-cytoplasmic solute receptor family protein 171 {ECO:0000313|EMBL:ADP19339.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans (strain A8).;"
SCNpilot_cont_300_bf_scaffold_1543_curated_11
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11569..11916)
DNA (348bp) protein (116aa)
ISAfe1, transposase n=1 Tax=Acidithiobacillus sp. GGI-221 RepID=F8XQZ7_9GAMM
Transposase IS110 {ECO:0000313|EMBL:AIJ48428.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni TK102.;"
Mobile element protein
Displaying 11 items

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