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SCNpilot_cont_300_bf_scaffold_79_curated_32

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(36225..36563)

Top 3 Functional Annotations

Value Algorithm Source
photosystem reaction center subunit H n=1 Tax=Variovorax paradoxus RepID=UPI000370F757 similarity UNIREF
DB: UNIREF100
  • Identity: 86.6
  • Coverage: 112.0
  • Bit_score: 208
  • Evalue 3.50e-51
Variovorax paradoxus strain MEDvA23 contig_10, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ35284.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.5
  • Coverage: 112.0
  • Bit_score: 196
  • Evalue 1.90e-47
prc-barrel domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 82.1
  • Coverage: 112.0
  • Bit_score: 195
  • Evalue 7.30e-48

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 339
ATGACCATCTCGGCAAACGTCATTTCCTCGGAGCGGGTCGAAGGAACCGCCGTCTACAACACGGCCGGCGACAAGCTCGGCACCATCGATGACCTCATGATCGACAAACTGTCCGGCCAGGTGCGCTACGCCGTCTTGGAATTCGGCGGCTTCCTGGGCATCGGCAAAGACCGTTATCCCATTCCATGGAGCATGTTGAAGTACGACACGGCCCAGGACGGCTATGTGGTTCCCCTGCAGAAGGAAACGCTCGACGGCGCACCGAAGTACGCCGAAGCCAGCGTGCCCGACTACGACGACCGCTACACCGCCAGCATCAACAACTACTACGGTCTTTGA
PROTEIN sequence
Length: 113
MTISANVISSERVEGTAVYNTAGDKLGTIDDLMIDKLSGQVRYAVLEFGGFLGIGKDRYPIPWSMLKYDTAQDGYVVPLQKETLDGAPKYAEASVPDYDDRYTASINNYYGL*