ggKbase home page

SCNpilot_cont_300_bf_scaffold_79_curated_35

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 37561..40740

Top 3 Functional Annotations

Value Algorithm Source
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SJ79_METPP similarity UNIREF
DB: UNIREF100
  • Identity: 61.0
  • Coverage: 999.99
  • Bit_score: 1252
  • Evalue 0.0
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:ABM95618.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.0
  • Coverage: 999.99
  • Bit_score: 1252
  • Evalue 0.0
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase similarity KEGG
DB: KEGG
  • Identity: 61.0
  • Coverage: 999.99
  • Bit_score: 1252
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methylibium petroleiphilum → Methylibium → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3180
ATGGTGCATTTCATTACGCGTCGCCTCAGTCGGCTCAGCGTTGGCCGCAAGCTGCTGGTCATCTACCTGCTCGACCTGAGCGCGGTCATCTTCATCAGCGGCATCCTCATCAACGAGAAGTTCATCGCGATCGATTTCGGCCGCAAGGAGATGGCGGGCGCGGCCTACATCGACCGCATGCGCACGGCGCTGCTGGCCACCGCCGGCTGGCACGGCGCCGATCCCGCGCCGCCGCAGGCGCTCGAGCAGCTCGAACAGCAGTACGGCGAGGGCCTGCAGAGCGCCGAGATCAGCCAGCGGTTCCGTGCGGCGCTGGCGTCGGCCGCCCAGACCGGGCCCGCCGGGCTCGAGGCGGCCAAGCGCGCGGCGCTCGAGCAGGGACGCGCACTGGTCACGCGCATCGGCAACCAGTCGAACCTGATCCTCGACCCCGACCTCGACAGCTACTACACGATGTCCCTGGTCTTGCTGCGCTTTCCGGAGTTGCTCGAACTCGGCTCAGACATGGCCGCGCGCCTGCACGCGCCCGGTGCCAGCGGGCTTGCCGCGACCGAGGCGCGCACGCAGTACTTCATTCTCGAGGGGCGCATCGACGCGATCGCGGCCAGCATCAAGAGCGACTATGCGGAGGCCTTCGCCGCCGCCAAGGGGCCCTTGCAGGCGCGGCTCGAGCCCTCGCGTGCGCGCCTGCTGGCCAGCATCGACGCCTTCAGGCGGGCATCGCGCAGCGTGCTGGAGTCGAGCGACAGCAGCGACAACAGCGGAAGCAGCCGCGGTCTCGTGGCGTTCGATGCGGCCCAACAGACGTTGTTCGCCGAACTCGACGGCGCATGGTCCGGCGCCATCGGCGAGCTCGACGCCATGCTCACCTCGCGAGAGCACGGTTTCTTCGCGCGCATGTGGATGCACCTGGGCACGGCGCTGTTCCTGCTGCTGATGATCCTCACGGCGGTCTTCTACGTGGCGCGCCAGATCTCGCTGCCCCTGCGCCGGCTGTCCGGCGTGGTCGACACCGTGCGCCGCACCGGCGACCACAGCCTGCGCGCGCATTGGGACAGCGGCGACGAGATCGGCCTGCTGGTGCTGGGCTTCAACGACATGCTCGCGCAGCTCGACCGCCAGCGGCAGGCGCAGCAGGAGCTCGCGGCCAGCGCCCGCGCAGCCGAGGCGCAACGAGATCTGGTCGCGGCCATTCCGATTCCGCTGATGGTCACGGCCATCCCGACCCACGAGGTGCTCAACGCCAACCCCAGTGCGCAGGCCTGGCTTGGCGGCGGCACGCGCGACCCCTGGGCGCTGGGCGTGGCGCCCGGCGTGCGCTCGCGCTTCTTCCAGCAGCTGGCCGATCGCGGCGCCGTCGACGAGTTCGAGGTGCGCTGGCTCGGAGGCGCCGAGCCGTCGTGGGCGGTGCTGTCGGCGCGGCGGCTGGTCTACCAGGGGCAGGACGCGCTGCTCACCGCCTTCACGCCCATCAACCACCTCAAGCTGATGGAGCAGCGGCTGATGCTCTGGGCCAAGGTGTTCGAGGCCTCGTCCGAAGGCATCCTGATCATCAACGGGGAGCACCGCATCCTCACGGCGAACCGCGCGCTGTGCCGCCTCACGGGCCACGACCTGGGCGATCTCGTGGGCGAGCCACCCGAGCAGCTCATGAGCGACGGCTCCCTGCATTTCGCGGACCTGTGGCCGGTGCTCGACCAGCGCGGCACCTGGCAGGGCGAGGTCACCGTGCGCCGGCGCAACGGCGACAGCTACCCCGCGTGGCTGGTCGCCAGCGTGGTGCGCGACGGGCCGGAGCGCATCTCGCACTACATCTTCACGTCCATCGACGTGAGCGACCGCAAGCGCAGCGAGGCGCGCATCCGCTTCCTGGCCCATCACGACGTGCTGACCGAGCTGCCCAACCGGTCGCTGTGCATCGAGCGGCTGGGACTGGCGCTGCAGCAGGCGCAACGCAAGGGGCAGCGCGTGGGCGTGCTGTTCATCGACCTGGACCGCTTCAAGAACATCAACGACTCGCTGGGTCACCACGTGGGCGACGCGCTGCTGCGCTCGGTGGCCGCGCGCATGAGCCAGGCCGTGCGGCCGGGCGACACGGTGAGCCGCCTGGGCGGCGACGAGTTCGTCGTGGTGCTCAACAACGTGGCCGACGGGCAGGAGATCCTTTCGCTGGTCGAGCGCCGGCTCATCTCGCTGATCCGCCAGCCGCACGACATCGACGGCGCCGAGATCCATGTGTCGTGCAGCGTGGGCATCGCGGTGTACCCCGACGACGCGCAGGACATCGATGCGCTCATGCGCCATGCCGACGTGGCCATGTACCAGAGCAAGGCGAGCGGGCGCGACACCGCGCGCTTCTTCACGCCCGAGATGAACGAGCGCGCCCAGCAGCGGCTGCAGCTGGAGTCCAGCCTGCGCCACGCGATCGAGCGCGACGAGCTGAGCCTGCACTACCAGCCGCGCATCGACGCGCACAGCGGCGAGCTGATCTGCGTGGAGGCGCTGCTGCGCTGGCAGAGCGCGGAGCTGGGACAGGTGCGGCCCGCACAGTTCATCCCGATCGCCGAAGAGTCGGGGCAGATCGTGGCCATCGGCGCATGGGTGATCGAGCAGGCCTGCGCGCAGCACGCCGCCTGGCGCCGCGACGGGCTGGGGGCGATCCGGGTGGCGATCAACATGTCGGCGCTGCAACTGCGCGACGGCGGCCTGCTCGAGGTGCTGCGCGGCGCCATTGCGCTGTACGGCGTGTCACCCGGCGATCTGGAGATCGAACTCACCGAGTCGACGCTGATGGACGCGGCTGAGCAGTCGCTGGTGCAGCTGCACGCGCTGAAGTCGCTCGGCGTGATGCTGTCGATCGACGATTTCGGCACCGGCTATTCAAGCCTGAACTACCTGAACCGATTTCCCATCGACAAGCTGAAGATCGATCGCTCGTTCATTCACAAGATGCTCGGCGACCCGACCGACATGGCCATTGCCCGGGCGATCATCGGGCTGGGTCATACCCTGGGACTGCGCGTGGTGGCCGAAGGCGTGGAGCGGCGCGAGGAAGCAGACACCCTGCGCGCGGCGCGATGCGACGAGCTGCAGGGTTATCTCATCTCCCGGCCGATGCCGGCAGGCAAGCTGGCGGGGTGGATTGCACAGGCCTCGCGGCCCGCGTGGTGCGCAGGATAG
PROTEIN sequence
Length: 1060
MVHFITRRLSRLSVGRKLLVIYLLDLSAVIFISGILINEKFIAIDFGRKEMAGAAYIDRMRTALLATAGWHGADPAPPQALEQLEQQYGEGLQSAEISQRFRAALASAAQTGPAGLEAAKRAALEQGRALVTRIGNQSNLILDPDLDSYYTMSLVLLRFPELLELGSDMAARLHAPGASGLAATEARTQYFILEGRIDAIAASIKSDYAEAFAAAKGPLQARLEPSRARLLASIDAFRRASRSVLESSDSSDNSGSSRGLVAFDAAQQTLFAELDGAWSGAIGELDAMLTSREHGFFARMWMHLGTALFLLLMILTAVFYVARQISLPLRRLSGVVDTVRRTGDHSLRAHWDSGDEIGLLVLGFNDMLAQLDRQRQAQQELAASARAAEAQRDLVAAIPIPLMVTAIPTHEVLNANPSAQAWLGGGTRDPWALGVAPGVRSRFFQQLADRGAVDEFEVRWLGGAEPSWAVLSARRLVYQGQDALLTAFTPINHLKLMEQRLMLWAKVFEASSEGILIINGEHRILTANRALCRLTGHDLGDLVGEPPEQLMSDGSLHFADLWPVLDQRGTWQGEVTVRRRNGDSYPAWLVASVVRDGPERISHYIFTSIDVSDRKRSEARIRFLAHHDVLTELPNRSLCIERLGLALQQAQRKGQRVGVLFIDLDRFKNINDSLGHHVGDALLRSVAARMSQAVRPGDTVSRLGGDEFVVVLNNVADGQEILSLVERRLISLIRQPHDIDGAEIHVSCSVGIAVYPDDAQDIDALMRHADVAMYQSKASGRDTARFFTPEMNERAQQRLQLESSLRHAIERDELSLHYQPRIDAHSGELICVEALLRWQSAELGQVRPAQFIPIAEESGQIVAIGAWVIEQACAQHAAWRRDGLGAIRVAINMSALQLRDGGLLEVLRGAIALYGVSPGDLEIELTESTLMDAAEQSLVQLHALKSLGVMLSIDDFGTGYSSLNYLNRFPIDKLKIDRSFIHKMLGDPTDMAIARAIIGLGHTLGLRVVAEGVERREEADTLRAARCDELQGYLISRPMPAGKLAGWIAQASRPAWCAG*