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SCNpilot_cont_300_bf_scaffold_79_curated_37

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(42063..43331)

Top 3 Functional Annotations

Value Algorithm Source
RuBisCO-like protein; K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] similarity KEGG
DB: KEGG
  • Identity: 90.9
  • Coverage: 419.0
  • Bit_score: 764
  • Evalue 1.50e-218
ribulose bisphosphate carboxylase n=1 Tax=Variovorax paradoxus RepID=UPI000363587B similarity UNIREF
DB: UNIREF100
  • Identity: 93.8
  • Coverage: 422.0
  • Bit_score: 797
  • Evalue 6.50e-228
Variovorax paradoxus strain MEDvA23 contig_70, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ25205.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.8
  • Coverage: 425.0
  • Bit_score: 767
  • Evalue 1.00e-218

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1269
ATGACGCCCGAGCGCGTGCGCGCGCGGTACCTGATCGAGACACCGCATGACGTGGCCGCCGTGGCACAGGTCATGGCCGGCGAACAGTCGTGCGGCACTTTCACGCGCGTCGAGGGAGAAACCGATGCGCTGCGCGCACGCGCACGCGCCACGGTCGAGGCGATCACCGAGCTGGCGCCGGCCGAGGCGCCGAGCCTGCCGAACGCCCTGCTCGAACGCCGAGGCGCGCGGGGCCCGTGGCGGCGCGCGCACGTCGACATTTCGTTCCCGGTGGCCAACATCGGCACGAACCTGCCGACATTGGCCGCGACCGTGTCGGGCAACCTCTACGACCTGGGCGAAGTGACAGGGCTGCGGCTCGAAGCCCTGCAGGTGCCCGGGCCCTACCGCGCGCGGTTCGAGATGCCGCGCGCCGGCATCGCCGGCACGCGGCGTGCGACCGGCGTGACGAGCGGCGCGCTCGTCGGCACCATCATCAAGCCGAACGTCGGCCTTTGCGCCGCGCAGACGGCCGAGCTCGTCGGCCGGCTCTGCGCGGCAGGCGTCGACTTCATCAAGGACGACGAGGTGTGCGCCGATCCAACGCATGCGCCGCTGGCCGAGCGCGTGCCGGCCGTGATGGCCGTCGTGCGCGCGCATCAGGAGCGCACCGGCAAGCATGTGATGGTGGCCTTCAACATCACCGACGAGACCGACGCGATGAAGCGGCATGCCGACCTCGTCGAACGCGAAGGCGGCTCGTGCGTGATGGCCAGCCTGAACTGGTGCGGGCACTCGGGCATCCAGACCCTGCGTCGGCACACGGGGCTCGCGTTGCACGGACACCGCAACGGCTACGGCGCGCTGTCGCGACATCCGCTGCTGGGCATTTCGTTCCAGGCGTACCAGACGCTGTGGCGCCTGGCGGGTGTGGACCACATGCACGTGCACGGCTTGCAGGGCAAGTTCTCGCAGCCTGACAGCGAAGTCATCGCGTCCGCACGGGACTGCTTCGCACCCCTGAGCGATGCGGCGGATGATCGCGTGATGCCGGCCTTTTCCTCGGGCCAATGGGCCGGCACCGTGCCCGCGACGTGGAAGGCCATCGGCAGCGAGGACCTGCTCTTCATGGCCGGCGGCGGCATCCTCGCGCATCCCGACGGCGCGGCCGCCGGCGTGACGAGCATCCGCCAGGCATGGTCGGCCGCGCGCGCGGGCGTGCCGCTGGTGGACGCCGCCAGGGACCTGCCCGAACTGGCCCGCGCCCTCGCCTTCTTCGGCAGGCCATGA
PROTEIN sequence
Length: 423
MTPERVRARYLIETPHDVAAVAQVMAGEQSCGTFTRVEGETDALRARARATVEAITELAPAEAPSLPNALLERRGARGPWRRAHVDISFPVANIGTNLPTLAATVSGNLYDLGEVTGLRLEALQVPGPYRARFEMPRAGIAGTRRATGVTSGALVGTIIKPNVGLCAAQTAELVGRLCAAGVDFIKDDEVCADPTHAPLAERVPAVMAVVRAHQERTGKHVMVAFNITDETDAMKRHADLVEREGGSCVMASLNWCGHSGIQTLRRHTGLALHGHRNGYGALSRHPLLGISFQAYQTLWRLAGVDHMHVHGLQGKFSQPDSEVIASARDCFAPLSDAADDRVMPAFSSGQWAGTVPATWKAIGSEDLLFMAGGGILAHPDGAAAGVTSIRQAWSAARAGVPLVDAARDLPELARALAFFGRP*