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SCNpilot_cont_300_bf_scaffold_380_curated_30

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(31820..32458)

Top 3 Functional Annotations

Value Algorithm Source
Putative threonine efflux protein n=1 Tax=Variovorax sp. CF313 RepID=J2JIY0_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 95.8
  • Coverage: 212.0
  • Bit_score: 401
  • Evalue 6.90e-109
Putative threonine efflux protein {ECO:0000313|EMBL:EJL67865.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.8
  • Coverage: 212.0
  • Bit_score: 401
  • Evalue 9.60e-109
lysine exporter protein LysE/YggA similarity KEGG
DB: KEGG
  • Identity: 90.0
  • Coverage: 210.0
  • Bit_score: 375
  • Evalue 9.70e-102

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 639
ATGATCGGCCTCGCGACCCTCTCGCTGTTCCTGCTGGCGGTGCTGGCGCTGTTCCTGTCGCCGGGCCCGAACATGGCGTTCGTGCTGTCGCACGGCGTGGCGCACGGACCGCGCGGTGGGTTCGCGGCGGCGCTCGGCATCTCGGCGGCGGACCTGGTCCACACGCTGTTCGCGGCCACCGGCGTCACCGCGCTGGTTGCTGCATGGCCGCCTTCGTTCGACTTGCTGCGCTATGCCGGCGCGCTGTACCTGGCGTGGCTGGCGATGCAGGCCCTGCGTGACGGCGGCGGCCTTCGCATCGGCGCGAAGGCGCAGCCGGCAGGCTTCGGCCGCATCGTGCGCATGGCGCTGCTGAACAACCTGGTGAATCCGAAGGCGCTGCTGTTCTTCATGGTGTTCCTGCCGCAGTTCGTCGACCCCGCGCGCGGCAGCGTGCCGCTGCAGCTGGTGCAACTGGGCGTGGTGCTGTCGATGGCCGCGCTGGCCTTCAACACCCTGCTGGGCGCATGCAGCGGGCAGGTCGGGCGCTGGCTGCACAACCGGCCCGGCGCGGCGCGTTTCCAGAGCGGCCTGCTGGCCGCAGTGATGCTGGGGCTGGCCGTGCGCCTGCTCTTCCTCGATCGTCCTTCCCCTCGCTGA
PROTEIN sequence
Length: 213
MIGLATLSLFLLAVLALFLSPGPNMAFVLSHGVAHGPRGGFAAALGISAADLVHTLFAATGVTALVAAWPPSFDLLRYAGALYLAWLAMQALRDGGGLRIGAKAQPAGFGRIVRMALLNNLVNPKALLFFMVFLPQFVDPARGSVPLQLVQLGVVLSMAALAFNTLLGACSGQVGRWLHNRPGAARFQSGLLAAVMLGLAVRLLFLDRPSPR*