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SCNpilot_cont_300_bf_scaffold_380_curated_31

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(32493..33695)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator with HTH domain and aminotransferase domain containing protein n=1 Tax=Variovorax sp. CF313 RepID=J3CB09_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 96.8
  • Coverage: 400.0
  • Bit_score: 758
  • Evalue 2.40e-216
Transcriptional regulator with HTH domain and aminotransferase domain containing protein {ECO:0000313|EMBL:EJL67866.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.8
  • Coverage: 400.0
  • Bit_score: 758
  • Evalue 3.40e-216
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 93.5
  • Coverage: 400.0
  • Bit_score: 733
  • Evalue 3.50e-209

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1203
ATGAACTGGAAACTCGCCGCACGCGCCGCAAAGATGAACCCCTCGGTGCTGCGTGAAATCCTGAAGGTCACCGAACGCCCCGGCATCATCAGCCTGGCCGGCGGCCTGCCCTCGCCCAAGACCTTCCCGATCCAGGCGTTCGCCGACGCCTGCGCCGAAGTACTGCACAACGACGGCCAGGCCGCGCTGCAGTACGCCGCCAGCGAAGGCTACGCGCCGCTGCGCCAGGCCGTGGCCGACATGCTGCCGTGGGACGTCGACGCCTCGCAGGTGCTCATCACCACCGGCTCGCAGCAGGGCCTCGACCTTGTGGCCAAGGTGCTGATCGATCCGGGCAGCAAGGTGCTGGTCGAAACGCCCACCTACCTCGGCGCGCTGCAGGCCTTCGGCCCGATGGAGCCGAACCCCGTGGGCGTGGCGAGCGACGACGAAGGCGTGGTCGTCGACGACCTCGTGGCCAAGGCCAAGGACGCGCGCTTCGTCTACCTGCTGCCCAACTTCCAGAACCCCACGGGCCGCACCATGACCGAGGAGCGCCGCGCCGCCGTGTCGGCCGCCGCCGCTGCCGCCAACCTGCCGATCGTCGAGGACAACCCCTACGGCGAACTCTGGTTCGACGAAGCCCCGCCGCTGCCGCTAGCCGCGCGCAACCCCGAGGGCGTGATCTACCTGGGCTCGTTCTCGAAGGTGCTGGCGCCCGGCCTGCGCCTGGGCTTCCTGGTGGCGCCCAAGTCGATCTACCCGAAACTGCTGCAGGCCAAGCAGGCCGTCGACCTGCACACGCCGATCTTCACGCAGCGCATGGTCTCGGCCGTGATGAAGGACAAGTTCCTCGACCGCCACGTGCCCACCATCCGCGCGCTGTACAAGCGCCAGCGCGACGCGATGATCGCCGCGCTCAAGCGCGAGATGGCGGGCCTGGACGTGAAGTTCAATGCGCCCAAGGGCGGCATGTTCCTGTGGGCGCGCCTGCCCGAGGGCGTCGACACCGTCACGCTGCTGCCCAAGGCCGTGGAGCGCAACGTGGCCTTCGTGCCCGGCGCGCCGTTCTACGCGGGCCAGGGCGATCCGCGCACGCTGCGGCTGTCGTTCGTGACCGCCAGCGTGGAAGAGATCGACACCGCCATCGCCGCGCTGGCCCAGACGCTGCGCGAAGAGCTGGCGCTGCTCGGCGACACGAAGCTGGCCGCCGCGCAGATCTGA
PROTEIN sequence
Length: 401
MNWKLAARAAKMNPSVLREILKVTERPGIISLAGGLPSPKTFPIQAFADACAEVLHNDGQAALQYAASEGYAPLRQAVADMLPWDVDASQVLITTGSQQGLDLVAKVLIDPGSKVLVETPTYLGALQAFGPMEPNPVGVASDDEGVVVDDLVAKAKDARFVYLLPNFQNPTGRTMTEERRAAVSAAAAAANLPIVEDNPYGELWFDEAPPLPLAARNPEGVIYLGSFSKVLAPGLRLGFLVAPKSIYPKLLQAKQAVDLHTPIFTQRMVSAVMKDKFLDRHVPTIRALYKRQRDAMIAALKREMAGLDVKFNAPKGGMFLWARLPEGVDTVTLLPKAVERNVAFVPGAPFYAGQGDPRTLRLSFVTASVEEIDTAIAALAQTLREELALLGDTKLAAAQI*