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SCNpilot_cont_300_bf_scaffold_380_curated

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Displaying items 31-52 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_380_curated_31
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32493..33695)
DNA (1203bp) protein (401aa)
Transcriptional regulator with HTH domain and aminotransferase domain containing protein n=1 Tax=Variovorax sp. CF313 RepID=J3CB09_9BURK
Transcriptional regulator with HTH domain and aminotransferase domain containing protein {ECO:0000313|EMBL:EJL67866.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
GntR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_380_curated_32
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33749..34732)
DNA (984bp) protein (328aa)
DMT(Drug/metabolite transporter) superfamily permease n=1 Tax=Variovorax sp. CF313 RepID=J2K3N2_9BURK
DMT(Drug/metabolite transporter) superfamily permease {ECO:0000313|EMBL:EJL67868.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_380_curated_33
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34729..35328)
DNA (600bp) protein (200aa)
Putative threonine efflux protein n=1 Tax=Variovorax sp. CF313 RepID=J3CAW4_9BURK
Putative threonine efflux protein {ECO:0000313|EMBL:EJL67869.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_380_curated_34
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35451..36896
DNA (1446bp) protein (482aa)
GntR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI00036D0324
Transcriptional regulator with HTH domain and aminotransferase domain containing protein {ECO:0000313|EMBL:EJL67870.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
GntR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_380_curated_35
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36988..37740
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J3CB12_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL67871.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_380_curated_36
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37786..39066
DNA (1281bp) protein (427aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036898BB
Uncharacterized protein {ECO:0000313|EMBL:EJL67872.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_380_curated_37
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39085..40386)
DNA (1302bp) protein (434aa)
dadA1; D-amino acid dehydrogenase small subunit DadA (EC:1.4.99.1)
Glycine/D-amino acid oxidase, deaminating n=1 Tax=Variovorax sp. CF313 RepID=J2K3N7_9BURK
Glycine/D-amino acid oxidase, deaminating {ECO:0000313|EMBL:EJL67873.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
SCNpilot_cont_300_bf_scaffold_380_curated_38
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40863..41933
DNA (1071bp) protein (357aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
dtdp-glucose 4,6-dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
dTDP-glucose 4,6-dehydratase n=1 Tax=Variovorax sp. CF313 RepID=J3CAW7_9BURK
SCNpilot_cont_300_bf_scaffold_380_curated_39
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41930..42820
DNA (891bp) protein (297aa)
rfbD1; dTDP-4-dehydrorhamnose reductase RfbD (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase RfbD {ECO:0000313|EMBL:AGU52633.1}; EC=1.1.1.133 {ECO:0000313|EMBL:AGU52633.1};; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
dTDP-4-dehydrorhamnose reductase RfbD n=1 Tax=Variovorax paradoxus B4 RepID=T1XJ94_VARPD
SCNpilot_cont_300_bf_scaffold_380_curated_40
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42841..43728
DNA (888bp) protein (296aa)
rmlA; glucose-1-phosphate thymidylyltransferase RmlA (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Variovorax paradoxus B4 RepID=T1X645_VARPD
SCNpilot_cont_300_bf_scaffold_380_curated_41
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43725..44273
DNA (549bp) protein (183aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13); K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Variovorax paradoxus RepID=UPI0003758503
Variovorax paradoxus strain MEDvA23 contig_44, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ29608.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
SCNpilot_cont_300_bf_scaffold_380_curated_42
Bartonella tamiae, Bartonella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44432..46081
DNA (1650bp) protein (550aa)
Uncharacterized protein n=2 Tax=Bartonella tamiae RepID=J1JYS8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJF90252.1}; TaxID=1094558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bartonellaceae; Bartonella.;" source="Bartonella tamiae Th239.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_380_curated_43
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46541..47641
DNA (1101bp) protein (367aa)
glutamine--scyllo-inositol transaminase (EC:2.6.1.50); K00837 [EC:2.6.1.-]
Glutamine--scyllo-inositol transaminase {ECO:0000313|EMBL:ABQ27351.1}; EC=2.6.1.50 {ECO:0000313|EMBL:ABQ27351.1};; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
erythromycin biosynthesis sensory transduction protein eryC1 n=1 Tax=Henriciella marina RepID=UPI0003709D5E
SCNpilot_cont_300_bf_scaffold_380_curated_44
Chamaesiphon minutus, Chamaesiphon, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

47656..48600
DNA (945bp) protein (315aa)
family 2 glycosyl transferase n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000289CD57
glycosyl transferase
Glycosyl transferase {ECO:0000313|EMBL:AFY91603.1}; TaxID=1173020 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Chamaesiphon.;" source="Chamaesiphon minutus PCC 6605.;"
SCNpilot_cont_300_bf_scaffold_380_curated_45
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48901..50619
DNA (1719bp) protein (573aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI0003759F75
Capsular polysaccharide biosynthesis protein-like protein {ECO:0000313|EMBL:EDM70641.1}; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. AzwK-3b.;"
capsular polysaccharide biosynthesis protein-like protein
SCNpilot_cont_300_bf_scaffold_380_curated_46
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50642..51748
DNA (1107bp) protein (369aa)
Aminotransferase, DegT/DnrJ/EryC1/StrS family n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q1LCN1_RALME
vioA; DegT/DnrJ/EryC1/StrS family aminotransferase
Tax=CG_Hydro_01
SCNpilot_cont_300_bf_scaffold_380_curated_47
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51777..52475
DNA (699bp) protein (233aa)
hypothetical protein id=12493914 bin=THIO_HI species=Rhizobium leguminosarum genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=CG_Hydro_01
SCNpilot_cont_300_bf_scaffold_380_curated_48
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52478..53440
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Enterobacter cloacae subsp. dissolvens SDM RepID=I6RLR3_ENTCL
hypothetical protein
Tax=CG_Hydro_01
SCNpilot_cont_300_bf_scaffold_380_curated_49
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53444..54406
DNA (963bp) protein (321aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00037C9350
hypothetical protein
Tax=CG_Hydro_01
SCNpilot_cont_300_bf_scaffold_380_curated_50
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

54403..54873
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI0003728CCB
glycoprotease
Tax=BJP_IG2103_Bacteroidetes_37_22
SCNpilot_cont_300_bf_scaffold_380_curated_51
Ferriphaselus amnicola, Ferriphaselus, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54863..55615
DNA (753bp) protein (251aa)
Bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase {ECO:0000313|EMBL:GAO32351.1}; TaxID=1188319 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Ferriphaselus.;" source="Ferriphaselus amnicola.;"
hypothetical protein id=12493919 bin=THIO_HI species=Rheinheimera sp. A13L genus=Rheinheimera taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein rbh
SCNpilot_cont_300_bf_scaffold_380_curated_52
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

Not on your lists

55612..56292
DNA (681bp) protein (227aa)
YkcC n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FTL4_9RHOB
family 2 glycosyl transferase
Tax=RBG_16_Planctomycetes_43_13_curated
Displaying items 31-52 of 52 in total

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