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SCNpilot_cont_300_bf_scaffold_380_curated_40

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 42841..43728

Top 3 Functional Annotations

Value Algorithm Source
rmlA; glucose-1-phosphate thymidylyltransferase RmlA (EC:2.7.7.24) similarity KEGG
DB: KEGG
  • Identity: 93.9
  • Coverage: 294.0
  • Bit_score: 559
  • Evalue 5.10e-157
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.9
  • Coverage: 294.0
  • Bit_score: 559
  • Evalue 2.30e-156
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Variovorax paradoxus B4 RepID=T1X645_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 93.9
  • Coverage: 294.0
  • Bit_score: 559
  • Evalue 1.60e-156

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 888
ATGACGCAACGCAAAGGCATCATCCTCGCAGGCGGCTCGGGCACCCGGCTGCATCCCGCGACGCTCGCCATGAGCAAGCAACTGCTCCCGGTGTACGACAAGCCGATGATCTACTACCCGCTGAGCACGTTGATGCTCGGCGGCATGCGCGACATCCTGATCATCAGCACGCCACAGGACACCCCCCGCTTTCAGCAACTGCTGGGCGACGGTAGCCAGTGGGGCATCAATCTCCAGTACGCCGTTCAGCCGAGCCCCGACGGTCTGGCGCAGGCTTTCATCATCGGTGACAAGTTCGTCGGCAATGCCCCCAGCGCCCTCGTGCTTGGCGACAACATTTTCTATGGGCACGACTTCGCACAATTGCTCGGCGATGCCGACGAGCAGAAGGCCGGGGCAACCGTGTTTGCTTATCACGTCCATGACCCGGAGCGCTATGGCGTGGTGGCTTTCGATGCGCAGGGCAAGGCCAGCAGCATCGAGGAAAAACCGTTGAAGCCCAAAAGCAACTACGCCGTGACGGGGCTTTATTTCTACGACAACCAGGTCATCGATATTGCGAAAGCGGTGAAGCCGAGCGCCCGTGGTGAACTCGAAATTACCGCAGTCAATCAAGCCTACCTCGATCTTGGTCAATTGAATGTCCAGATCATGCAGCGCGGCTACGCCTGGCTAGACACCGGCACGCACGAGAGCTTGCTCGAGGCGGGGCAGTTCATTGCAACGCTGGAGCATCGGCAGGGGCTCAAGATCGCCTGTCCGGAAGAAATTGCGTGGCGCCACGGCTTCATCGATAGCGAGCAGCTTGCCAGGCTTGCCGCACCGCTTCAGAAAAACGGCTACGGCAAATACCTCAACCACCTGCTGGCCGAGGGAGTGCGTTCATGA
PROTEIN sequence
Length: 296
MTQRKGIILAGGSGTRLHPATLAMSKQLLPVYDKPMIYYPLSTLMLGGMRDILIISTPQDTPRFQQLLGDGSQWGINLQYAVQPSPDGLAQAFIIGDKFVGNAPSALVLGDNIFYGHDFAQLLGDADEQKAGATVFAYHVHDPERYGVVAFDAQGKASSIEEKPLKPKSNYAVTGLYFYDNQVIDIAKAVKPSARGELEITAVNQAYLDLGQLNVQIMQRGYAWLDTGTHESLLEAGQFIATLEHRQGLKIACPEEIAWRHGFIDSEQLARLAAPLQKNGYGKYLNHLLAEGVRS*