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SCNpilot_cont_300_bf_scaffold_380_curated_41

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 43725..44273

Top 3 Functional Annotations

Value Algorithm Source
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13); K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] similarity KEGG
DB: KEGG
  • Identity: 78.9
  • Coverage: 180.0
  • Bit_score: 297
  • Evalue 2.90e-78
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Variovorax paradoxus RepID=UPI0003758503 similarity UNIREF
DB: UNIREF100
  • Identity: 81.1
  • Coverage: 180.0
  • Bit_score: 303
  • Evalue 1.30e-79
Variovorax paradoxus strain MEDvA23 contig_44, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ29608.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.0
  • Coverage: 180.0
  • Bit_score: 297
  • Evalue 9.90e-78

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 549
ATGAAGGTCACGCGGACGGCCATTGCAGATGTGCTGCTGATCGAGCCCACTGTTTTTGGCGATGCCCGGGGTTTTTTCTTCGAAAGCTTCAACCAGAAGGCGTTCGATGAGGCGGTCGGCGCGCATGTCGAGTTTGTCCAGGACAATCATTCGCGCTCGACCAAAGGGGTGTTGCGCGGGTTGCACTATCAGCTGCAGCAGCCGCAAGGCAAGCTTGTGCGCGTGGTGCGCGGTGCGGTTTTCGATGTTGCCGTGGACATCCGCAAGTCATCGCCCACCTTCGGCCAATGGGTCGGAAGTGAACTGTCCGAAGAGAACCACACGCAATTGTGGGTTCCTCCGGGGCTGGCCCACGGATTCCTGGTGCTCAGCGACTCCGCCGACTTTCTCTACAAGACGACGGACTACTATGCGCCGAAGCATGAACGGTGCATTGCATGGAACGACGAGACGTTGTCGATTGCCTGGCCGGATATCGGTGTGGCACCCAAGCTGTCAGCAAAGGATGCTGCGGCACCGACCTTTGCCTTGGCCGAGCTGGGCGAATAG
PROTEIN sequence
Length: 183
MKVTRTAIADVLLIEPTVFGDARGFFFESFNQKAFDEAVGAHVEFVQDNHSRSTKGVLRGLHYQLQQPQGKLVRVVRGAVFDVAVDIRKSSPTFGQWVGSELSEENHTQLWVPPGLAHGFLVLSDSADFLYKTTDYYAPKHERCIAWNDETLSIAWPDIGVAPKLSAKDAAAPTFALAELGE*