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SCNpilot_cont_300_bf_scaffold_380_curated_34

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 35451..36896

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI00036D0324 similarity UNIREF
DB: UNIREF100
  • Identity: 95.6
  • Coverage: 481.0
  • Bit_score: 916
  • Evalue 1.40e-263
Transcriptional regulator with HTH domain and aminotransferase domain containing protein {ECO:0000313|EMBL:EJL67870.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.6
  • Coverage: 481.0
  • Bit_score: 903
  • Evalue 1.40e-259
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 92.9
  • Coverage: 481.0
  • Bit_score: 898
  • Evalue 7.50e-259

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1446
ATGCTGACAAGAACCTCCACGCAGTCGCTCACGGGACAGCTGGCCGACCGGCTGGCCGAACGCATCCGAACCCGGCTCTTGCCGCCCGGTGCGCGGCTGCCCTCGGTGCGCGAATGCGCGCGGCAGCAGGGGGTGAGCCCGTACACGGTCGTCGCCGCCTACGACCAGTTGCTGGCGCAGGGGCTGGTCGAGGCCCGCCGGCAGCGCGGTTTCTACGTGCGCGACGCCGCGCCGGTACAGGACGGCCGCCCGGCCAACGGCGCGGACGCCGCCGGCGTGATCGGCATGCCCGCCGCCATTGCCGTGCAGATGATGGCCTCGCGCGTGCCCGCCGATGCCAGTTCGCTGATCCGCAGCATGTTCCACCGCCCGAGCGACAAGCCGCAGCCGGGCATGGGCGTTTTCCCGCCCGACTGGATGTCTTCGACCTTCATGCCCACGGCCGTGCGGCGCATGACCAATACAGCCGCGCTGCAGGAGCTGTCGCTCCAGTACGGCGAGCCGGCCGGCGACATGAGCCTGCGGCGCAGCCTGTCGCAGAAGCTGGTGGGCATCAACGTGCCGGCTTCGCCCGACCAGATCGTGACCACCATCGGCGCCACGCACGCGCTGGACATCGTGAGCCGCACGCTGCTGCGCGCGGGCGACCCGGTGATGGTCGAGGAGCCCGGATGGGCGCTCGAATTCGCGCGGCTCGAGGCGCTGGGCATGCGCATCCTGCCGGTGCCGCGCCGCGCCGACGGGCCCGACCTGGAAGTGATGGCGCAGTACTGCAAGCTGCACAGCCCCAAGCTGTTCGTGAGCGTGAGCGTGCTGCACAACCCCACCGGCTACAGCCTCACGCCGGGCAGCGCGCACCGCGTGCTCAAGCTGGCGAACGAATACGACTTCCACATCGTCGAGGACGACACCTACAGCCACCTCGCGCCCGAACACGCCACCCGTCTCAGCGCGCTCGACGGGCTGCAGCGCACCATCTACGTGAGCGGCTTCGCCAAGATCCTGGCGCCCAACTGGCGCATCGGCTTCTTCGCCGCGCCGCCCGCGCTGAAAGAGCGGCTGCTGGAGACCAAGCTGCTGGCCACGCTGACCTCGCCCACGCTGTTCGAGCGGGCGCTGTCGTGGTGCATCGACCAGGGGCAGCTTCGCCGGCATTCGGAGCGGGTGCGCATCCGCCTGGACGGCGCGCGGGGCCGGGCGGTGAAGCTGGCGATGTCGCACGGCTGCACCTTCGCGTCGGAGCCGGCGGGGCTGTTCGGCTGGGTCGACACGGGCGTGGACACCGACGCGCTCACGCAGCGCATGCTCGACCAGGGCTACCTGCTGGCGCCGGGCTCGCTCTTTCATGCGCGCCGCCCGCCGAGCACCATGATGCGCATCAACTTCGCGACCTCGCAGGATGCGACGTTCTGGAAGGTTTTCAGCAAGGTCCGCGACGAACTCTGA
PROTEIN sequence
Length: 482
MLTRTSTQSLTGQLADRLAERIRTRLLPPGARLPSVRECARQQGVSPYTVVAAYDQLLAQGLVEARRQRGFYVRDAAPVQDGRPANGADAAGVIGMPAAIAVQMMASRVPADASSLIRSMFHRPSDKPQPGMGVFPPDWMSSTFMPTAVRRMTNTAALQELSLQYGEPAGDMSLRRSLSQKLVGINVPASPDQIVTTIGATHALDIVSRTLLRAGDPVMVEEPGWALEFARLEALGMRILPVPRRADGPDLEVMAQYCKLHSPKLFVSVSVLHNPTGYSLTPGSAHRVLKLANEYDFHIVEDDTYSHLAPEHATRLSALDGLQRTIYVSGFAKILAPNWRIGFFAAPPALKERLLETKLLATLTSPTLFERALSWCIDQGQLRRHSERVRIRLDGARGRAVKLAMSHGCTFASEPAGLFGWVDTGVDTDALTQRMLDQGYLLAPGSLFHARRPPSTMMRINFATSQDATFWKVFSKVRDEL*