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SCNpilot_cont_300_bf_scaffold_380_curated_45

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 48901..50619

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI0003759F75 similarity UNIREF
DB: UNIREF100
  • Identity: 37.5
  • Coverage: 387.0
  • Bit_score: 268
  • Evalue 1.90e-68
Capsular polysaccharide biosynthesis protein-like protein {ECO:0000313|EMBL:EDM70641.1}; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. AzwK-3b.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 29.6
  • Coverage: 416.0
  • Bit_score: 166
  • Evalue 1.10e-37
capsular polysaccharide biosynthesis protein-like protein similarity KEGG
DB: KEGG
  • Identity: 29.7
  • Coverage: 377.0
  • Bit_score: 127
  • Evalue 1.60e-26

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Taxonomy

Roseobacter sp. AzwK-3b → Roseobacter → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1719
GTGCCTGGAAGAGCCGTTGCAGAGCCGGCTCCGATTGCGCCGGCCAACGAGGCGGTGGCTGTATCGCCCCCGATCGACATCTATGCCGAGCATGCCAAGTGGATGGCGCTTGCAGGCCAGCGTGATTTCGACGGTGCCATCGAGCTTTGCCTTTCGACCATCAAGGCTCCGGATACAAGCTTCGTGGCATCGCTGTTTCTGGGCTACGCTTATTTCCAGAGCGGAAGGCCCTCTGAAGCGCAACGGCATCTCATTCCGGCTGTGGCCTTGAATGCAGGTGACTTCTACGCAAATCTGCTGCTCGCGCACGTCGAGAAGGCCTTGGGTGCGCCTCGAGAGGCCCTCGCCAGGTACATGACCTGCTGCACCCTGGATGCGGCATCGGTCGTCGAACCCTTCGAGGCGGCCATGGATATTGCGCTGCCGATGCGTGAGGCGGAGGAGGGGGAGGCGCTCTCGACGCTTTTCGACAAGCTCCATGCCGCGGACAAGCTCCCGGATCCGTTGGTGTTGAAGTTCCTGTTCTTCTGGCGGCGAGATGCCGACCTCGTCGGCTTGCTGGTCCGGGCTGAAGAGGCGGGGAAGCCGAAAGCATCGTTCCGTCACGTCCGTACCGTGCAGGACTGGGCGTTGGCACATGGCGAGAACTATGTGAGCCTGGGCGAGCCGGTTTCTATTCGGCTGGTTACGCCAACGGAGACGTACCGCGACGCTCCCAAGGAGAAGCATGTGCTGGGCAGCGCTCCATACATTGCCGAAGTGCGTAATGCAAGCATCGTGGGTAACTCGAGCCTCATCTACGCCGGGGATGCGGACGTGTTGTCGGACGTGTTGGCGCATCCGCTTTACGGTGAACAAGTCAGTCTCGCCTACGACAAGACCGTGATTGCGCAACGGTCCGATGCCCTGTTGCTCGCGCAGCAGGGTGCCAGTGAAAGACTTGACGAAGGAATCATGCTCTCGGGACTTGCGAGCAATGCCTATGGCCACTGGTTTGCCGAATTTCTTCCGAAGCTGCGCTACTTTGAAAGAAACCCGCGGTTCGAACAGTTGCCGATCATTGTCGACGCAGGCATGCCGCAATCGCATTTCGACTTTCTGGCGGCACTTGTTGGAAACCCGTTGCATCGAATCGAAAGTGGCCAAGTGCTGGAAGTGGGGTGCCTCCATGTTGCGCCGACCACCACATTCTTTCCCGTGGAATTGTTCAGGGATCATGGTGTTCCGCCCGAACATCAGGCCTCGTGGAGCGCCGAGTCCATGCAATACATCAAGGACAGGATCGCCAAAGGTCGGAAGCTTCCTGGCCAGCGCTCGCGCCGCTTGTTTCTTTCGCGAAAAAACAGCAGCTGGCGGCTGCTGCGCAACGAGAGCGAACTCATCGAAGACCTGCAGTCGATGGGGTTCGAGACGGTCTTCATGGAAGAACTCGACTTCGAGCATCAAGTGCGGACCTTCGGCGAAGCGGAATTCGTCGTGGCGCCGAACGGTTCCGCGCTGAACAGCCTCATCTTCGCTGCGCCAGAGGTCAAGGCCTTGATCCTGGGGCAGCAGAACAGCTTCAATTGGGGCGGCTGGCTGGGGCCGATGCTCGATCTCGGGTTCAATCCCGAATTCCTTGAAGGCGAGGCTGTGGAGAGCACGGACTTCAAGCATTCCGACTACGTTGTTTCCGTCGCAAAAGTGCACGCTAAAGTGCACGAGATGCTGCATTCTTGA
PROTEIN sequence
Length: 573
VPGRAVAEPAPIAPANEAVAVSPPIDIYAEHAKWMALAGQRDFDGAIELCLSTIKAPDTSFVASLFLGYAYFQSGRPSEAQRHLIPAVALNAGDFYANLLLAHVEKALGAPREALARYMTCCTLDAASVVEPFEAAMDIALPMREAEEGEALSTLFDKLHAADKLPDPLVLKFLFFWRRDADLVGLLVRAEEAGKPKASFRHVRTVQDWALAHGENYVSLGEPVSIRLVTPTETYRDAPKEKHVLGSAPYIAEVRNASIVGNSSLIYAGDADVLSDVLAHPLYGEQVSLAYDKTVIAQRSDALLLAQQGASERLDEGIMLSGLASNAYGHWFAEFLPKLRYFERNPRFEQLPIIVDAGMPQSHFDFLAALVGNPLHRIESGQVLEVGCLHVAPTTTFFPVELFRDHGVPPEHQASWSAESMQYIKDRIAKGRKLPGQRSRRLFLSRKNSSWRLLRNESELIEDLQSMGFETVFMEELDFEHQVRTFGEAEFVVAPNGSALNSLIFAAPEVKALILGQQNSFNWGGWLGPMLDLGFNPEFLEGEAVESTDFKHSDYVVSVAKVHAKVHEMLHS*