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SCNpilot_cont_300_bf_scaffold_74_curated_18

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 14274..14927

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Variovorax paradoxus RepID=UPI000372A68F similarity UNIREF
DB: UNIREF100
  • Identity: 98.2
  • Coverage: 217.0
  • Bit_score: 400
  • Evalue 1.20e-108
multiple antibiotic resistance (marc)-like protein; K05595 multiple antibiotic resistance protein similarity KEGG
DB: KEGG
  • Identity: 96.8
  • Coverage: 217.0
  • Bit_score: 397
  • Evalue 3.20e-108
UPF0056 inner membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.8
  • Coverage: 217.0
  • Bit_score: 397
  • Evalue 1.40e-107

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 654
ATGAGCACATCGATGGACCTGATCAAGCCGCTGGTCACGCTGGTGGCCATCGTCAACCCGCTGGCCATCGTGCCTTTCTTCATCCACTACACGCAGGGCTACACCGACGCGCAGCGCCGGCACACGGTGCGCATGTCGGCCTTCAGCGCGTTCGTGGTCATCGCCGTGAGCGCGCTCATCGGGCTTCAGCTGCTGTCCTTCTTCGGCATCTCGATCGCGAGCTTCCAGGTCGGCGGCGGGCTGCTGCTGCTCATGAGCTCGCTGTCGATGCTCAACGCCAAGCCGGCCGAGAGCAAGACCAACGTCGAGGAGCTGCGCGCCACCGAAGTCAAGGCGTCGATGGGCGCATCGATCGCCGTGGTGCCGCTGACCATTCCGCTGCTCACCGGACCGGCCGCCATCTCCACGGTGGTGATCTACGCCGACAAGGCGCAGCACCTGTGGGAGCTGGCCATTCTGGTGGGCTACGGCGTGGTGGTGGCGCTGGCCACGGCGCTGGCGTTTTCGCTCGCGCAGCCGATCGCACGGGTGCTCGGCAAGACCGGCATCAACATCATGACGCGGCTGATGGGCCTGATCCTCGCGGCGCTCGCGGTCGAAGTCATGGCCGACGGCCTGGGCAAGCTGTTCCCGATACTGAACAAGCTCGCCTGA
PROTEIN sequence
Length: 218
MSTSMDLIKPLVTLVAIVNPLAIVPFFIHYTQGYTDAQRRHTVRMSAFSAFVVIAVSALIGLQLLSFFGISIASFQVGGGLLLLMSSLSMLNAKPAESKTNVEELRATEVKASMGASIAVVPLTIPLLTGPAAISTVVIYADKAQHLWELAILVGYGVVVALATALAFSLAQPIARVLGKTGINIMTRLMGLILAALAVEVMADGLGKLFPILNKLA*