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SCNpilot_cont_300_bf_scaffold_72_curated_2

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 6156..6803

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00035E703F similarity UNIREF
DB: UNIREF100
  • Identity: 86.5
  • Coverage: 215.0
  • Bit_score: 377
  • Evalue 1.10e-101
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 69.8
  • Coverage: 215.0
  • Bit_score: 307
  • Evalue 4.30e-81
Variovorax paradoxus strain MEDvA23 contig_14, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ34619.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.8
  • Coverage: 215.0
  • Bit_score: 307
  • Evalue 1.50e-80

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 648
GTGGGCCTCGCTATCAGCATCGGCGTGCTCGCCGATCTGCTCGAACATGATCCCGAAGGGGCCGAATGGCTCCAGGAGGAATTGGCGGTGGTGAACAAGGTGCTGGCGGCGGCGGGCCTTCCGCCGCACGCCGAGCCCCGTGAACTGCCGCCGCTGCAATCGCGCGCGCGGATCGGCAGCTTTCCGTACTCGTTCATCCACTACCTGCGCCGGGCCTACGCGCACCGCGCGAACTCGCCCGGCTGGATGGCAACGCCGGTGGAGGACGGTGTCGACCCCTCGGAAGATCCGGTGGTGGAAGACGTGCTCTATAGCTCGCAGAGCCACCTGGTCTGCCACTCGGACGCGGAAGGCTTCTACGTGCCGGTCGATTTCGACGAGGTGCTGTATTCCGAACCCGACGGCGACGAGCAACTGGCCGGCGGCATGCTCGGCTCTTCCTACCGCCTGCTCGACGAACTCGTGCTGGTGGCGCCCGCGCTCGGCATCAGCCTCGTCGACGGCCAGCTGTCGGACGCGGAGGCCGAGCGAATCGGCAAGCTGATCGATGCCGACCAAGGCCTCTACCGGGAGTACGTGTCGTGGCTGCGGCTCTACGAATCGGCCCGGCTGAGCATCGCGCACAAGACGGCGATCGTCTTCAACTGA
PROTEIN sequence
Length: 216
VGLAISIGVLADLLEHDPEGAEWLQEELAVVNKVLAAAGLPPHAEPRELPPLQSRARIGSFPYSFIHYLRRAYAHRANSPGWMATPVEDGVDPSEDPVVEDVLYSSQSHLVCHSDAEGFYVPVDFDEVLYSEPDGDEQLAGGMLGSSYRLLDELVLVAPALGISLVDGQLSDAEAERIGKLIDADQGLYREYVSWLRLYESARLSIAHKTAIVFN*