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SCNpilot_cont_300_bf_scaffold_72_curated

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Displaying items 1-30 of 214 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_72_curated_1
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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107..6133
DNA (6027bp) protein (2009aa)
Large extracellular alpha-helical protein n=1 Tax=Variovorax sp. CF313 RepID=J3CTX7_9BURK
Large extracellular alpha-helical protein {ECO:0000313|EMBL:EJL78131.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
alpha-2-macroglobulin domain-containing protein; K06894
SCNpilot_cont_300_bf_scaffold_72_curated_2
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6156..6803
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00035E703F
hypothetical protein
Variovorax paradoxus strain MEDvA23 contig_14, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ34619.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
SCNpilot_cont_300_bf_scaffold_72_curated_3
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6807..7220
DNA (414bp) protein (138aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V2H4_VARPE
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ADU35695.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
SCNpilot_cont_300_bf_scaffold_72_curated_4
Bacillus badius, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7217..7810
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Pseudomonas alcaliphila RepID=UPI00036722EE
Uncharacterized protein {ECO:0000313|EMBL:KIL75849.1}; TaxID=1455 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus badius.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_72_curated_5
Burkholderia mallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7812..8249
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI0003818C41
Uncharacterized protein {ECO:0000313|EMBL:KGC13950.1}; TaxID=13373 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia mallei (Pseudomonas mallei).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_72_curated_6
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8310..8678
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V2H3_VARPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU35694.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
SCNpilot_cont_300_bf_scaffold_72_curated_7
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8820..9686
DNA (867bp) protein (289aa)
beta-lactamase (EC:3.5.2.6); K01467 beta-lactamase [EC:3.5.2.6]
Beta-lactamase {ECO:0000256|RuleBase:RU361140}; EC=3.5.2.6 {ECO:0000256|RuleBase:RU361140};; Flags: Precursor;; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
Beta-lactamase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V2H1_VARPE
SCNpilot_cont_300_bf_scaffold_72_curated_8
Xenorhabdus bovienii, Xenorhabdus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9686..10810
DNA (1125bp) protein (375aa)
beta-lactamase n=1 Tax=Acidovorax radicis RepID=UPI00023774AE
Beta-lactamase {ECO:0000313|EMBL:CDG92315.1}; TaxID=1397852 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Xenorhabdus.;" source="Xenorhabdus bovienii str. feltiae Florida.;"
beta-lactamase
SCNpilot_cont_300_bf_scaffold_72_curated_9
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10869..11786
DNA (918bp) protein (306aa)
Transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J3CTX4_9BURK
Transcriptional regulator {ECO:0000313|EMBL:EJL78126.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
LysR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_72_curated_10
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11931..12614
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI0003619A19
Variovorax paradoxus strain MEDvA23 contig_72, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ24789.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_72_curated_11
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12657..13982
DNA (1326bp) protein (442aa)
MFS transporter n=1 Tax=Variovorax paradoxus RepID=UPI00036B46B6
Major Facilitator Superfamily transporter {ECO:0000313|EMBL:EJL78124.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
major facilitator superfamily protein
SCNpilot_cont_300_bf_scaffold_72_curated_12
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13990..14709
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2KYQ5_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL78123.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_72_curated_13
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14712..16061
DNA (1350bp) protein (450aa)
amidase; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
amidase n=1 Tax=Variovorax paradoxus RepID=UPI00036DCBE5
Amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit {ECO:0000313|EMBL:EJL78122.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
SCNpilot_cont_300_bf_scaffold_72_curated_14
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16118..16732
DNA (615bp) protein (205aa)
GNAT family acetyltransferase n=1 Tax=Pseudomonas sp. M47T1 RepID=I4N5A2_9PSED
Variovorax paradoxus strain MEDvA23 contig_72, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ24786.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
acetyltransferase, GNAT family
SCNpilot_cont_300_bf_scaffold_72_curated_15
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16729..17223
DNA (495bp) protein (165aa)
Putative N-acetyltransferase, GNAT family n=1 Tax=Variovorax paradoxus B4 RepID=T1X8Q9_VARPD
putative N-acetyltransferase, GNAT family
Putative N-acetyltransferase, GNAT family {ECO:0000313|EMBL:AGU48545.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_cont_300_bf_scaffold_72_curated_16
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17259..17537
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V2G1_VARPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU35682.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
SCNpilot_cont_300_bf_scaffold_72_curated_17
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17623..18024
DNA (402bp) protein (134aa)
aldehyde-activating protein n=1 Tax=Variovorax paradoxus RepID=UPI00036AB708
Variovorax paradoxus strain MEDvA23 contig_72, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ24783.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_72_curated_18
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18077..18703
DNA (627bp) protein (209aa)
Lysine exporter protein (LYSE/YGGA) n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CRR4_VARPS
lysine exporter LysE/YggA
Lysine exporter protein (LYSE/YGGA) {ECO:0000313|EMBL:ACS17996.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
SCNpilot_cont_300_bf_scaffold_72_curated_19
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18716..18925)
DNA (210bp) protein (70aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000367A70F
Uncharacterized protein {ECO:0000313|EMBL:EJL78119.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_72_curated_20
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19112..21361
DNA (2250bp) protein (750aa)
penicillin-binding protein 1c (EC:2.4.1.129); K05367 penicillin-binding protein 1C [EC:2.4.1.-]
Penicillin-binding protein 1C n=1 Tax=Variovorax sp. CF313 RepID=J2KYQ1_9BURK
Penicillin-binding protein 1C {ECO:0000313|EMBL:EJL78118.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
SCNpilot_cont_300_bf_scaffold_72_curated_21
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21415..22830
DNA (1416bp) protein (472aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V2F6_VARPE
hypothetical protein; K06872 uncharacterized protein
Uncharacterized protein {ECO:0000313|EMBL:ADU35677.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
SCNpilot_cont_300_bf_scaffold_72_curated_22
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22837..23730)
DNA (894bp) protein (298aa)
Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UVC8_VARPE
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADU38722.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
SCNpilot_cont_300_bf_scaffold_72_curated_23
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24078..24758
DNA (681bp) protein (227aa)
Transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J2THY0_9BURK
Transcriptional regulator {ECO:0000313|EMBL:EJL78117.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
GntR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_72_curated_24
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24755..26071
DNA (1317bp) protein (439aa)
MFS transporter n=1 Tax=Variovorax paradoxus RepID=UPI00037AAAD6
Cyanate permease {ECO:0000313|EMBL:EJL78116.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
putative transporter, MFS-type
SCNpilot_cont_300_bf_scaffold_72_curated_25
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26084..26884)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2KD21_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL78115.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_72_curated_26
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26909..27553
DNA (645bp) protein (215aa)
ABC transporter n=1 Tax=Variovorax paradoxus RepID=UPI000376EC04
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADU35673.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
SCNpilot_cont_300_bf_scaffold_72_curated_27
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27688..29925
DNA (2238bp) protein (746aa)
isocitrate dehydrogenase, NADP-dependent (EC:1.1.1.42); K00031 isocitrate dehydrogenase [EC:1.1.1.42]
Isocitrate dehydrogenase, NADP-dependent, monomeric type n=1 Tax=Variovorax sp. CF313 RepID=J3CTW5_9BURK
Isocitrate dehydrogenase, NADP-dependent, monomeric type {ECO:0000313|EMBL:EJL78111.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
SCNpilot_cont_300_bf_scaffold_72_curated_28
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30044..30391
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2KD16_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL78110.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_72_curated_29
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30402..30977)
DNA (576bp) protein (192aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UZ77_VARPE
two component LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ADU35494.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
SCNpilot_cont_300_bf_scaffold_72_curated_30
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31204..32214
DNA (1011bp) protein (337aa)
Transcriptional regulator, AraC family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6VBB0_VARPE
Variovorax paradoxus strain MEDvA23 contig_49, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ28220.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
AraC family transcriptional regulator
Displaying items 1-30 of 214 in total

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