ggKbase home page

SCNpilot_cont_300_bf_scaffold_72_curated_26

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 26909..27553

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter n=1 Tax=Variovorax paradoxus RepID=UPI000376EC04 similarity UNIREF
DB: UNIREF100
  • Identity: 76.5
  • Coverage: 213.0
  • Bit_score: 327
  • Evalue 9.70e-87
ABC transporter similarity KEGG
DB: KEGG
  • Identity: 75.6
  • Coverage: 213.0
  • Bit_score: 322
  • Evalue 9.90e-86
ABC transporter related protein {ECO:0000313|EMBL:ADU35673.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.6
  • Coverage: 213.0
  • Bit_score: 322
  • Evalue 4.40e-85

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 645
GTGAACACCACCCCACCCTTCCCACCCATCCTGCAGCTGCAGGACATCGGCTTCGCCTACCCCGGCCAGAGCGCCATCGCATCCGGTTGGACCGCCTCGATCGGCCCCGGCGTGACGCTGCTTCATGGCGACACCGGCGCCGGCAAGTCGGCCCTGCTCCAGGTGATCGCTGGCGTGCTGCCAGCCGGCGGCGGCCGGCTGACGGTGGCCGGCACGCGCCTGGACGCCTCGCCCGAGGCCTACCGGCGCCAGGTCTTCTTCGTCGACCCGACCACCGACCGCTTCGACCAGCTCACCGCCCGCGAGTGCACGCGGCAGCTGACCGAGGGCGACACCGGCTTCGACCCCGCCGCCTGGCAGGCGCTGGCCGACGGCTTTTCGCTCGAGCCGCACCTCGACAAGAAGCTGTTCATGCTGTCCACCGGCTCCCGGCGCAAGGTCTGGATGGCGGCCGGGCTCGCCTCGGGCCGGCCGCTGGTTCTGCTCGACGAGCCCACGGCCGGGCTCGACGCCGGCTCGACCCGCTGTCTCTGGCAGGCGCTCACGGGCGTGGCGGCGCAGGAGCGCAGGGCCGTTCTGGTCGCCAGCGCGGCGCGGATCGACACCGTGCCGCTGGCCGCTACCATCGCTCTGCCGCTGGATTGA
PROTEIN sequence
Length: 215
VNTTPPFPPILQLQDIGFAYPGQSAIASGWTASIGPGVTLLHGDTGAGKSALLQVIAGVLPAGGGRLTVAGTRLDASPEAYRRQVFFVDPTTDRFDQLTARECTRQLTEGDTGFDPAAWQALADGFSLEPHLDKKLFMLSTGSRRKVWMAAGLASGRPLVLLDEPTAGLDAGSTRCLWQALTGVAAQERRAVLVASAARIDTVPLAATIALPLD*