ggKbase home page

SCNpilot_cont_300_bf_scaffold_72_curated_27

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 27688..29925

Top 3 Functional Annotations

Value Algorithm Source
isocitrate dehydrogenase, NADP-dependent (EC:1.1.1.42); K00031 isocitrate dehydrogenase [EC:1.1.1.42] similarity KEGG
DB: KEGG
  • Identity: 96.2
  • Coverage: 745.0
  • Bit_score: 1434
  • Evalue 0.0
Isocitrate dehydrogenase, NADP-dependent, monomeric type n=1 Tax=Variovorax sp. CF313 RepID=J3CTW5_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 96.1
  • Coverage: 745.0
  • Bit_score: 1435
  • Evalue 0.0
Isocitrate dehydrogenase, NADP-dependent, monomeric type {ECO:0000313|EMBL:EJL78111.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.1
  • Coverage: 745.0
  • Bit_score: 1435
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2238
ATGAGCACGAAGCAACCCACCATCGTCTACACCCTCACCGACGAGGCGCCCCTGCTGGCGACCTACGCGTTTCTGCCCATCGTGCGCGCGTTCACGACACCGGCCGGCATCAACCTCGAAACCAGCGACATCTCGGTGGCAGCCCGCATCCTGGGCGAATTCCCCGAATTCCTGAGCGACGACCAGAAGGTGCCCGACAACCTGGCCGAACTGGGCAAGCTCACGCTCAAGCCCGAAGCCAACATCATCAAGCTGCCCAACATCAGCGCTTCGGTCTCCCAGCTCAAGTCGGCGATCAAGGAACTGCAAGGCAAGGGCTACAAGATCCCCGACTACCCGGAAAACCCGACCTCGGATGAGGACAAGGACATCCGCGCCCGCTACAACAAGTGCACCGGCAGCGCGGTGAACCCCGTGCTGCGCGAAGGCAACTCCGACCGCCGCGCGCCCAAGGCCGTGAAGGAATACGCCCGCAAGAACCCGCACAGCATGGCCGACTGGAGCCAGGCCTCGCGCTCGCACGTCTCGCACATGCACGGCGGCGACTTCTATCACGGCGAAAAGTCCATGACGCTGGACCGCGCGCGCAACGTCAAGATGGAGCTGATCACCAAGAGCGGCAAGACCATCGTGCTCAAGCCCAAGGTCGCGCTGCTGGACCGCGAAGTCATCGACTCCATGTTCATGAGCAAGAAGGCCCTCCTGGCCTTCTATGAAAAGGAAATCGAAGACGCGCACAAGACCGGCGTGATGTTCTCGCTGCACGTCAAGGCCACCATGATGAAGGTCTCGCACCCCATCGTGTTCGGCCACTGCGTGAAGATCTTCTACAAGGAAGCCTTCGAGAAACACGGCAAGCTGTTCGACGAGCTGGGCATCAACGTCAACAACGGCATGGTCGACCTGTACACCAAGATCGCCGCGCTGCCGCAGAGCACGCAGGACGAGATCAAGCGCGACCTGCACGCCTGCCACGAGAACCGCCCCGAGCTGGCGATGGTCGACTCGGCCAAGGGCATCACCAACTTCCACTCGCCCAACGACGTGATCGTCGACGCCTCGATGCCCGCGATGATCCGCAACGGCGGCAAGATGTGGGGCGCCGATGGCCGCCTGAAGGACGTCAAGGCCGTGATGCCCGAATCGACCTTCGCCCGCATCTACCAGGAGATCATCAACTTCTGCAAGTGGCACGGCGCCTTCGACCCCAAGACCATGGGCACGGTGCCCAACGTGGGCCTGATGGCACAGAAGGCCGAGGAATACGGTTCGCACGACAAGACCTTCGAGATCCCCGAAGACGGCGTCGCCAACATCACCGACCTGGACACCGGTGAAGTGCTGATGAGCGAAGACGTGGAGCAAGGCGACATCTGGCGCATGTGCCAGGTCAAGGACGCCGCGATCCGCGACTGGGTCAAGCTGGCCGTCACCCGCGCGCGCAATTCGGGCATGCCCGTGGTGTTCTGGCTGGACGCCTACCGCCCGCACGAGGCGCAACTGATCACCAAGGTCAAGATGTACCTGCACGAGCACAACACCTCGGGCCTGGACATCCAGATCATGAGCCAGGTGCGCGCCATGCGTTACACGCTGGAGCGCGTGGTCCGCGGCCTGGACACCATCAGCGCCACCGGCAACATCCTGCGCGACTACCTGACCGACCTGTTCCCCATCATGGAACTGGGCACCTCGGCCAAGATGCTGTCGATCGTGCCGCTGATGGCCGGCGGCGGCCTGTACGAGACCGGCGCGGGCGGCTCGGCCCCCAAGCACGTGCAGCAACTGGTGGAAGAAAACCACCTGCGCTGGGACTCGCTGGGCGAATTCCTCGCGCTGGCCGTGAGCCTGGAAGACCTGGGCCTGAAGACCGGCAACAAGAAAGCCGCCATCCTGGCCAAGACGCTCGACACCGCCACCGGCAAGCTGCTGGACAACAACAAGAACCCGTCGCCCAAGACCGGCCAGCTCGACAACCGCGGCAGCCAGTTCTACCTGGCCATGTACTGGGCCCAGGAACTCGCGGCGCAGACCGACGACAAGGAACTGCAGGCATTGTTCGTGAAGCTGGCCGACTCGCTCACCAGCAACGAGAAGAAGATCGTCGACGAGCTGGCCGCCGTGCAGGGCAAGGCCGTGGACATCGGCGGCTACTACCTGGCCGACAAGGCGAAGTTCGAAACGGTGATGCGCCCGAGCGCCACGCTGAACGCGGCGCTGGCTTCCGCGCAAGGCTGA
PROTEIN sequence
Length: 746
MSTKQPTIVYTLTDEAPLLATYAFLPIVRAFTTPAGINLETSDISVAARILGEFPEFLSDDQKVPDNLAELGKLTLKPEANIIKLPNISASVSQLKSAIKELQGKGYKIPDYPENPTSDEDKDIRARYNKCTGSAVNPVLREGNSDRRAPKAVKEYARKNPHSMADWSQASRSHVSHMHGGDFYHGEKSMTLDRARNVKMELITKSGKTIVLKPKVALLDREVIDSMFMSKKALLAFYEKEIEDAHKTGVMFSLHVKATMMKVSHPIVFGHCVKIFYKEAFEKHGKLFDELGINVNNGMVDLYTKIAALPQSTQDEIKRDLHACHENRPELAMVDSAKGITNFHSPNDVIVDASMPAMIRNGGKMWGADGRLKDVKAVMPESTFARIYQEIINFCKWHGAFDPKTMGTVPNVGLMAQKAEEYGSHDKTFEIPEDGVANITDLDTGEVLMSEDVEQGDIWRMCQVKDAAIRDWVKLAVTRARNSGMPVVFWLDAYRPHEAQLITKVKMYLHEHNTSGLDIQIMSQVRAMRYTLERVVRGLDTISATGNILRDYLTDLFPIMELGTSAKMLSIVPLMAGGGLYETGAGGSAPKHVQQLVEENHLRWDSLGEFLALAVSLEDLGLKTGNKKAAILAKTLDTATGKLLDNNKNPSPKTGQLDNRGSQFYLAMYWAQELAAQTDDKELQALFVKLADSLTSNEKKIVDELAAVQGKAVDIGGYYLADKAKFETVMRPSATLNAALASAQG*