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SCNpilot_cont_300_bf_scaffold_72_curated_29

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(30402..30977)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, LuxR family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UZ77_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 44.0
  • Coverage: 168.0
  • Bit_score: 123
  • Evalue 2.50e-25
two component LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 44.0
  • Coverage: 168.0
  • Bit_score: 123
  • Evalue 7.80e-26
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ADU35494.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.0
  • Coverage: 168.0
  • Bit_score: 123
  • Evalue 3.50e-25

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 576
ATGCTGTCCAATAAAAAGACGAAGAGGATCCCCACCGAGCCGATGTCGATGCGCGAGGGTCAGCGCGGCACCGAGCCGGCCGCGCTGTCCATGGCCGCGCAGGCACTGTATGCGGATTCGGTGGCGGCGGCGAGCGCCGTGGGTTCGCTGTTTTCCGAGGCCAACGAGGTCGAGCTGGCCTTCCTGATGCGGCTGGTTTCGGAGGGCGATACGGCGACCGCGTTGCGGATCGCGCGGCGGATTCTGGATCCACGCCGGATGCCCGAGACAGGTGCGGTGGCAGAAGTGGCGCCGACGCCGGCGCCCGCCAAGCCGAGGCGCATGCGCAACCTGCAGCCGCCGGGCCTGGACCGGGCGCGGTCTTCGCTGTCTCCGCGCGAGCTGAAGGTGCTGCGGATGGTGTCCCAGGGCCTGAGCAACCGGCAGATCGCGGAGACCAGCTACCGCTCGCTCCACACGGTCGATGCGCAGGTCAAGAACATCTACCGCAAGCTGGCGGTGAAGTCGCGCGCACAGGCGGTGCGCGAAGGCATGCAAAGGGGCCTGCTCGACCCGGAGGCCCGGGGTAGCGCCTGA
PROTEIN sequence
Length: 192
MLSNKKTKRIPTEPMSMREGQRGTEPAALSMAAQALYADSVAAASAVGSLFSEANEVELAFLMRLVSEGDTATALRIARRILDPRRMPETGAVAEVAPTPAPAKPRRMRNLQPPGLDRARSSLSPRELKVLRMVSQGLSNRQIAETSYRSLHTVDAQVKNIYRKLAVKSRAQAVREGMQRGLLDPEARGSA*