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SCNpilot_cont_300_bf_scaffold_72_curated_11

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 12657..13982

Top 3 Functional Annotations

Value Algorithm Source
MFS transporter n=1 Tax=Variovorax paradoxus RepID=UPI00036B46B6 similarity UNIREF
DB: UNIREF100
  • Identity: 93.5
  • Coverage: 447.0
  • Bit_score: 829
  • Evalue 1.20e-237
Major Facilitator Superfamily transporter {ECO:0000313|EMBL:EJL78124.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.6
  • Coverage: 442.0
  • Bit_score: 829
  • Evalue 2.30e-237
major facilitator superfamily protein similarity KEGG
DB: KEGG
  • Identity: 90.2
  • Coverage: 441.0
  • Bit_score: 799
  • Evalue 7.40e-229

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1326
ATGACCGAACATGTTCTTCCCTCGCCGGCCACCGCTGGCGCCGCGCCCGCCGCGCCGCCCCCGAAGATGGGCCGGCTGGCCATGGCCAGCTCCATCGGCACCACGCTGGAGTGGTATGACTTCACCGTCTACAACATCATGGCGGCGCTGGTCTTCAACGCGGTGTTCTTCCCGTCGTTCGACCCGCTGACCGGCACCATCCTGGCCTTCTCGACCTACGCGGTCGGCTACATCTCGCGCCCGCTGGGCGGCGTGGTATTCGGCCACCTGGGCGACCGGCTGGGCCGCCGCTTCGTGCTGGTGGCCACGCTGGTCATCATGGGCGTTTCCACCGGCCTGATGGGCCTCCTGCCCACCTACGCGACATGGGGCATCTGGGCGCCCGTGACGCTGGTCGCGTTGCGCTTCGTGCAGGGCGTGGCGCTCGGCGGCGAATGGGCCGGCGCGGTGCTGCTGTCGATGGAACACGGCAAACCCGACGAGCGCGGCCGCAATGCCTCGTTCACGCAGGTCGGCCCGTCGTGCGGCACGCTGATCGGCACCGGCTTCATCGCCATCGTGTCGGCCTGGCTGAGCCCGGAAGACTTCCAGAGCTGGGGCTGGCGCATTCCGTTCATCTCCAGCGTCGCGCTGGTGCTGTTCGGCCTGTGGCTGCGCCGCGGTGTCGACGAGACGCCGGTGTTCCGCGAGATGGAAGAGAGGAAGGCCACCGCCAAGACGCCCATCAAGGAAGTGTTCACGCAGCACTGGCGCAGCCTGCTGGTGGCCGGCGGCTCGCGCATCGGCTCCGACGTGCTGTATGCGCTGGTGGTGGTGTTCACCCTGACCTACGTGACCACGGTGCTGCACCTGTCGCGTCCGCTGGCGCTCACCGCCACCATGATCGGCGCGGCCTGCAACGCGGTTGCGGTGCCGTGGTTCGGCAGCCTGTCGGACCGCATCGGCCGCCGCCCGGTCTACATTGCCGGCGCGCTGCTGGGCATGGTGTGGGCCTTCGTGTTCTTCGTGCTGATGGACAGCGCGCACCCGATCGCCATCTGCGCGGCGGTGGTGGTGGGCCTGTTGATCCACGCAATGATGTACGGCCCGCAGGCCGCCTTCGTGACCGAGCAGTTCCCCGGCCGCGTGCGCTATGCCGGCGCCTCGCTCGCCTACACGCTGGCGGGCATCCTGGGCGGCGGCTTCGCGCCGCTGATCATCGCGAGCCTGTTCAAGTCGTGGGGCAGCACCGCCGCCGTGTCGCTGTACGTGGTGGCCGCACTGGGCGTGACGCTGATCGCCCTGCTGGTGGCCCGCGAAACCGCCAAGCGCCCCCTGGAAAGCTGA
PROTEIN sequence
Length: 442
MTEHVLPSPATAGAAPAAPPPKMGRLAMASSIGTTLEWYDFTVYNIMAALVFNAVFFPSFDPLTGTILAFSTYAVGYISRPLGGVVFGHLGDRLGRRFVLVATLVIMGVSTGLMGLLPTYATWGIWAPVTLVALRFVQGVALGGEWAGAVLLSMEHGKPDERGRNASFTQVGPSCGTLIGTGFIAIVSAWLSPEDFQSWGWRIPFISSVALVLFGLWLRRGVDETPVFREMEERKATAKTPIKEVFTQHWRSLLVAGGSRIGSDVLYALVVVFTLTYVTTVLHLSRPLALTATMIGAACNAVAVPWFGSLSDRIGRRPVYIAGALLGMVWAFVFFVLMDSAHPIAICAAVVVGLLIHAMMYGPQAAFVTEQFPGRVRYAGASLAYTLAGILGGGFAPLIIASLFKSWGSTAAVSLYVVAALGVTLIALLVARETAKRPLES*