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SCNpilot_cont_300_bf_scaffold_72_curated_20

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 19112..21361

Top 3 Functional Annotations

Value Algorithm Source
penicillin-binding protein 1c (EC:2.4.1.129); K05367 penicillin-binding protein 1C [EC:2.4.1.-] similarity KEGG
DB: KEGG
  • Identity: 90.0
  • Coverage: 741.0
  • Bit_score: 1307
  • Evalue 0.0
Penicillin-binding protein 1C n=1 Tax=Variovorax sp. CF313 RepID=J2KYQ1_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 89.7
  • Coverage: 759.0
  • Bit_score: 1317
  • Evalue 0.0
Penicillin-binding protein 1C {ECO:0000313|EMBL:EJL78118.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.7
  • Coverage: 759.0
  • Bit_score: 1317
  • Evalue 0.0

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2250
ATGCAGTTCGCGCCTCCCTCCTTCGACCGCAAGGCCCTGGCCTTCGCCCTGCTCGCGGCGGTTTGCGCGCAACCGGCGCTGGCCCTCGTGAGCTTCGAGGAAGTGAAGCGTGACTTCCGCTCGTCGGACACCGCCGTGCTCGACCGCAACGGCGAACTGCTGCAGCGCGTGCGCACCGACCCCACCGTGCGGCGCGGCCAGTGGACGCCGCTGGCCGACGTGTCGCCGGCCCTGCGCACGGCGATGGTGCTGAGCGAGGACAAGCGCTTCTACGAACACAGCGGCATCGACTGGCGCGCCGTGTCCGCAGCGGCCTGGGGCAACCTTTGGAACACGCGCACGCGCGGCGCCTCGACCATCACGATGCAGCTCTCCGGCCTGCTCGACGACGATCTGCGACGCGCCTCGGGTGGCCGCAGCTTCACGCAGAAGATCGGCCAGACGGTGGCCGCCGCGCAGTTGGAGCGCAACTGGCGCAAGGACCAGATCCTGGAGGCCTACCTGAACACCGTGCCGTTCCGCGGCGAGATCGTGGGCATCGACGCGCTCTCGCGCACGCTCTTCGGCAAGGCGCCGAGCGGGCTCGACGCGCGCGAAGCCGCCGTGGCCTCGGCGCTGGTGCGCGCGCCCAATGCCAAGCCCGCGCTGGTGGCGCAGCGCGCCTGCGAGGTGCTGCGCACCATGGAGCCGCAGCAGAAGGTCGACTGCGAGGCGCTGGACATGTTCACCAGCGCCGCGGTGCAGCGCCGGGCCTTCGAGCCGAACGAGGGCATCGCGCCCCACGCGGCGAGGCGGGTGCTGCGCGAGATGCGGGATGCGAACGCGGCGGCGGACCCGGCGAAGAAAGGCAAGGACAAGGAAGCCAGCGTGCGAACCACACTGCGCGCGCCGCTGCAGCGCTTTGCGCTCGACACGCTGCAGCGCCACCTGCGCGAACTGCGCGACCGCCATGTGGAGGACGGCGCGCTCGTCGTGCTCGACAACGCCACCGGCGAAGTGCTGGCATGGGTCGGCTCCTCGGGCCCGCTGAGCCAGGCGGCCGAGGTCGACGGCGTGACCGCGCTGCGCCAGCCCGGCTCCACGCTCAAGCCGCTGCTCTACGGGCAGGCCATTGCCGAGCGGCGCATCACCGCCGCCTCGCTGATCGAGGACTCGTCGGCGCAGATCAGCACCGCCAGCGGCCTCTACATTCCGCAGAACTACGACCGCCGCTTCAAGGGCCCGGTGTCGGCGCGCACCGCGCTGGCCGCCTCGCTCAACGTGCCGGCCGTGCGAACGCTGGTGATGGTGTCGCCCGAAGCCTTCGCGCGCGAGCTGCGCGCCGCCGGCCTGCCGCTGCGCGAAAGCGGCGACTACTACGGCTACAGCCTTGCGCTCGGCAGCGCCGAGGTGTCGCTGCTGTCGCTCACCAACGCCTACCGCATGCTGGCCAACGGCGGACGCTACGGCACGACGACGCTGACCGCGCGGCCGACGCCCACGGCCCCCACGGCCGCCGACAAGGCCAGGGCCGCCGAGCCGCCCCTGCTCGACCCGCGCGCCGCCTTCATCGTCGGCGACATCCTCTCCGACCCGAACGCGCGCACCCGCACCTTCGGCCTGGACAGCATCCTCTCCACCCGCTTCTGGACCGCCGTGAAGACCGGCACCAGCAAGGACATGCGCGACAACTGGGCCGTGGGCTGGTCGCAGCGCTACACGGTCGGCGTGTGGGTGGGCAACGCCAGCGGCGCTTCGATGTGGGACGTGAGCGGCACCAGCGGCGCGGCGCCGGTGTGGGCCGAGGTGATGCGCTTCCTGCACGCGCGCGAGCCCAGCCGCGCGCCGGCGCCGCCTGCCGGCGTGGTGCAGGCGCATGTGGAATTCGGCCCCGGCGCCGACGGCGGCCCGCTGGAGGCTGCGCGCGACGAATGGTTTTTGCAAGGCACCGAGCAGCCCCTGTTCGCACTCGACACCGGCATGGCCGGCAGCGCCGCGTCGGCGCGCATCACCGCGCCGGCCGACGGCACCATCATCGCGGTCGACCCCGACATTCCGCCGCTGCGCCAGCGCGTGCGCTTCGAATCCGAAGGGCGCGGCGTGCAGTGGCGCATCGACGGCAAGCATTTCGCGCGCGGCAACAGCGCGCAGTGGCTGCCCTGGCCGGGGCGTCACGTGATCGAACTGGTCGACGGCTCGGGCAAGGTGGTCGATCAGCGCCGCATCGAAGTGCGCGGCGCGGGCGTCGTGACCAAGAGCGCGAAGCGATGA
PROTEIN sequence
Length: 750
MQFAPPSFDRKALAFALLAAVCAQPALALVSFEEVKRDFRSSDTAVLDRNGELLQRVRTDPTVRRGQWTPLADVSPALRTAMVLSEDKRFYEHSGIDWRAVSAAAWGNLWNTRTRGASTITMQLSGLLDDDLRRASGGRSFTQKIGQTVAAAQLERNWRKDQILEAYLNTVPFRGEIVGIDALSRTLFGKAPSGLDAREAAVASALVRAPNAKPALVAQRACEVLRTMEPQQKVDCEALDMFTSAAVQRRAFEPNEGIAPHAARRVLREMRDANAAADPAKKGKDKEASVRTTLRAPLQRFALDTLQRHLRELRDRHVEDGALVVLDNATGEVLAWVGSSGPLSQAAEVDGVTALRQPGSTLKPLLYGQAIAERRITAASLIEDSSAQISTASGLYIPQNYDRRFKGPVSARTALAASLNVPAVRTLVMVSPEAFARELRAAGLPLRESGDYYGYSLALGSAEVSLLSLTNAYRMLANGGRYGTTTLTARPTPTAPTAADKARAAEPPLLDPRAAFIVGDILSDPNARTRTFGLDSILSTRFWTAVKTGTSKDMRDNWAVGWSQRYTVGVWVGNASGASMWDVSGTSGAAPVWAEVMRFLHAREPSRAPAPPAGVVQAHVEFGPGADGGPLEAARDEWFLQGTEQPLFALDTGMAGSAASARITAPADGTIIAVDPDIPPLRQRVRFESEGRGVQWRIDGKHFARGNSAQWLPWPGRHVIELVDGSGKVVDQRRIEVRGAGVVTKSAKR*