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SCNpilot_cont_300_bf_scaffold_72_curated_22

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(22837..23730)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UVC8_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 75.7
  • Coverage: 296.0
  • Bit_score: 442
  • Evalue 2.90e-121
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 75.7
  • Coverage: 296.0
  • Bit_score: 442
  • Evalue 9.10e-122
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADU38722.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.7
  • Coverage: 296.0
  • Bit_score: 442
  • Evalue 4.00e-121

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 894
ATGAAGGACTTTTCTTTGTCGGACGTGCGGCTGTTCACGAAAGCCGCGCAGTTGGGAGGACTGACCCCCGCCGCCGATGTGCTGAACGTACCCAAGGCCTCCGCCTCGCGCCAGCTCCAGCGGCTGGAAGCCACGGTGGGCCATCTGCTGCTGCACCGCGGCTCCACGCGCTTCGCGCTGACCGAGGAGGGGCGCGAATTCCTGGTGGCGGCGCAGCATGTGCTGACCATCCTGGACGACGTCATGCTCAACCTGTCTTCCGGCGGCGACGCGGTGACGGGCCGGCTGCGCATCGTGGTGCCGCACTACTACGGCAGGGAGCTGCTCATGAGCCATCTGCCGCCGTTCATGACAGCCCATCCGCGGCTCGAAGTGGTGGTCGAGACCGGCAACGACCGCGCGGACCTGTTCCGCGACGAGGCCGACGTGGCCATTCGCCGCGGGCGAGACGGCTGCGACGAACTCGTGGCGCGTCACCTGAAAGACGAGCCGCTGATGCTGTGCGCCGCGCCCGACTACCTGGCGCCGCACCCGGCCATCGAGAACCTGCAGGACTTTTCACGGCATGTGTTCCTGACCACCGGCGAGGAGCGGCGCAAGCGGGAGGTGAACCTCGCGACCCTCGACAAGACCCACCGCATTCGCGTGGAGAGCGTGTTCCAGTCGGACGACCTCGAGTTGATCCTGCAACTGGCGCTGTCGGCCCGCGGCATTGCCCTGGTGCCGGTGTCGCTGGCGCAACCGCAGTTGGACATGGGGCTGCTGCTGCCGGTGCTGCCGCAAGTGAAGCTGAAGCCGCAGGAAATCAACCTGGTCTATCTGCCGTCGCGCCGCAATTCCCCGAAGATCAAGACCTTCGTCGACTACGTCCTGAGCATCTTCAGGTCGTTCTAG
PROTEIN sequence
Length: 298
MKDFSLSDVRLFTKAAQLGGLTPAADVLNVPKASASRQLQRLEATVGHLLLHRGSTRFALTEEGREFLVAAQHVLTILDDVMLNLSSGGDAVTGRLRIVVPHYYGRELLMSHLPPFMTAHPRLEVVVETGNDRADLFRDEADVAIRRGRDGCDELVARHLKDEPLMLCAAPDYLAPHPAIENLQDFSRHVFLTTGEERRKREVNLATLDKTHRIRVESVFQSDDLELILQLALSARGIALVPVSLAQPQLDMGLLLPVLPQVKLKPQEINLVYLPSRRNSPKIKTFVDYVLSIFRSF*