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SCNpilot_cont_300_bf_scaffold_72_curated_37

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 36474..37361

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI00037E3488 similarity UNIREF
DB: UNIREF100
  • Identity: 91.2
  • Coverage: 295.0
  • Bit_score: 546
  • Evalue 1.80e-152
Transcriptional regulator {ECO:0000313|EMBL:EJL78101.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.9
  • Coverage: 295.0
  • Bit_score: 544
  • Evalue 1.30e-151
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 91.5
  • Coverage: 295.0
  • Bit_score: 542
  • Evalue 1.10e-151

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 888
ATGGTTTCACCGCGTCTCCCCTCGACCCAGGGCCTGCAGGCCTTCGAGGCCGTCGCGCGCCTGCGCAGCGTGAACCTGGCGGCCGAAGAGCTCAGCGTGACGCCCAGCGCGGTGAGCCACCGCATCCGCCAGCTCGAGCTGCTGCTGGAGCTCAAGTTCTTCACCGGCGGTGATTTCAGCCTCAGCGCCGACGGCATGGCCTACCTGGCGCGCGTGCGGGAAGCCATTGCGGCACTGCAGCAAGTGCCCGGCCGCGAGCCGGCGTCGCAGGTGCGGCGGCTGCGCCTGGCGGTCACGCCCACCTTCTCGCGGCAGATGCTGCTGCCCAGGCTTGCGCGCTTTCGCGACACGTATCCGAACATCGAGCTGATGCTGCAGGTGACGGCGCCGATGCGCAACGCCACCCCCGAAGAAGCCGACCTGGAACTGCGCTTCGGCACCGGCCCCTTTCACGACCGCGAGTTCTGCCAGCTGCTGGCCGACGAGGTGTCGCCGGCGTGCAGCCCGGCCTACCTGCAACGCCACGGCCCATTCGAAGGCGGCTTCGCCACCGATGCCGAGGTGTCGCGCGCGCAACTGCTGCGCACGCCGCTGGAGTCGTGGCGCACCTGGTTCAAGGCCTGCGGCGTCGGCCTGCCCGAGCCCGCCACCGGCCACCAGTTCACCGACCTGGGGCTGGCGCTCGATGCGGCGGCCGAAGACTTCGGCGTGGTGCTCATGCACCTGAAGCTCGGCAGTGCCTGGCTCGACAACGGCCGGCTGGTGCGGCTGTCGCCGCGCAGCGTGCCCTCGCCCAACGCCTACTTTTTGTGCTGGCGGCCGGGCACCATGGAACGCTGGGAATGCGCCACCTTCGTCGAATGGCTGCGGCAGGCGCTGCGGGACTGA
PROTEIN sequence
Length: 296
MVSPRLPSTQGLQAFEAVARLRSVNLAAEELSVTPSAVSHRIRQLELLLELKFFTGGDFSLSADGMAYLARVREAIAALQQVPGREPASQVRRLRLAVTPTFSRQMLLPRLARFRDTYPNIELMLQVTAPMRNATPEEADLELRFGTGPFHDREFCQLLADEVSPACSPAYLQRHGPFEGGFATDAEVSRAQLLRTPLESWRTWFKACGVGLPEPATGHQFTDLGLALDAAAEDFGVVLMHLKLGSAWLDNGRLVRLSPRSVPSPNAYFLCWRPGTMERWECATFVEWLRQALRD*