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SCNpilot_cont_300_bf_scaffold_72_curated_206

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 221120..222847

Top 3 Functional Annotations

Value Algorithm Source
single-strandeD-DNA-specific exonuclease recj; K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-] similarity KEGG
DB: KEGG
  • Identity: 94.3
  • Coverage: 575.0
  • Bit_score: 1065
  • Evalue 0.0
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Variovorax sp. CF313 RepID=J3CEV1_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 96.0
  • Coverage: 575.0
  • Bit_score: 1084
  • Evalue 0.0
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:EJL70234.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.0
  • Coverage: 575.0
  • Bit_score: 1084
  • Evalue 0.0

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1728
ATGAAAATCATCGACCGGGAAATCCCGCCGCGCACCGTCTGGGCGCTGGAGCAGGCCGGCGTGCATCCGCTGCTGGCCCGCCTGTTCGCGGCCCGCGGCGTGCGCGCCAAGGACGAGCTCGACGACGGCCTCGCCCGCCTGCTGTCGCCCGACACCCTGCGTGGCACCCACGACGCGGCCGTGCTGCTGGCCGACGCCATCGCGCAGGACAAGCGCCTGTGCATCGTGGCCGACTACGACTGCGACGGCGCCACCGCCTGCGCGGTCGGCGTGCGCGGCCTGCGCCTGCTGGGCGCCAAGAACGTGAGCTACCTCGTGCCCGACCGCGTGGTCGACGGCTACGGCCTCACGCCGCCCATCGCCGAACGCGTGGCCGCGAGCGGCGCCGACATGCTGATCACCGTCGACAACGGCATCGCCAGCGTCGAGGGCGTGGCCGCCGCCAAGGCGCGCGGCCTGCAGGTGCTGGTGACCGACCACCACCTGCCCGGCCCCGAACTTCCCCTGGCCGACGTGCTGGTCAACCCGAACCAGCCAGGTTGCGAATTCGAGAGCAAGAGCATCGCCGGTGTCGGCGTGATGTTCTACGTGCTGCTGGCGCTGCGCTCCGAGTTGCGCAAGCGCGGCGTGTTCGACACGGCCACGCAACCCAAGCTCGATGCGCTGCTGCCGCTGGTCGCGCTCGGCACCGTGGCCGACGTGGTCAAGCTCGACGCCAACAACCGCCGCCTCGTGGCGCAGGGCCTGCGCCGCATCCGCGCCGGCGCGATGCCTGCCGGCGTGGCCGCGCTGTTCAAGGCGGCGAGCCGCCATGCATCGGCAGCCACCACCTTCGACTTCGGCTTTGCGCTGGGCCCGCGCATCAACGCGGCCGGCCGGCTGGCCGACATGACGCTGGGCATCGAATGCCTGCTGACCGACGACGCCGGCCGCGCGGAGGAACTCGCGCGCATGCTCGACGGCATCAACCGCGAACGGCGCGACATCGAGGGCGGCATGCGCGACCAGGCGCTGCTGCTGGCGGAGTCGCTGTTTTCCAACGGCACCGATGGCGAGGGCATCGCGGCACCGCCGCCGGCCATCAGCGTGTTCGATGCGGGCTTCCACGAAGGCGTGGTGGGCATCGTGGCCTCGCGCATCAAGGACCGTTTCCACCGTCCGACCTTCGTCTTCGCCGCGAGCGGCGCGCCGGGCAAGGAGCAGGAGCTGAAGGGCTCGGGCCGCTCGATCCCGGGCTTTCACCTGCGCGACGCGCTCGACCTCGTGGCCAAACGCCATCCGGGCGTGCTGCTGCGCTTCGGCGGCCATGCGATGGCGGCCGGCTGCACGGTGGCGCGCGAGCACTTCGAGACCTTCGAGAAAGGCTTCGCCCAGGTCGCCCGCGAGCTGCTGGCCGACGCCGCGCTCACCCGGCAGATCGAGACCGACGGGCCCATCGCCCGCGAGTACATGCGCATTGACCTCGTCGACACGCTGCACCGCGAGGTCTGGGGCCAGGGCTTCGCGCCGCCAACCTTCAGCGAGGAGGTCGAGGTGGTGTCGCAGCGGCTGGTGGGCGAAAAGCACCTGTCGCTCAAGCTGCGGCACCAGGGCCAGCCGATCGACGCCATGTGGTTCAGCCACACCGAGCCGTTGCCGCCCAGGGTCAAGCTGGCATTCCGGCTGGACGCGGACGAATGGCAGGGCGTGCGGCGGCTGCGCTTCCTGGTCGAAGGCGCGGAGTTCTAG
PROTEIN sequence
Length: 576
MKIIDREIPPRTVWALEQAGVHPLLARLFAARGVRAKDELDDGLARLLSPDTLRGTHDAAVLLADAIAQDKRLCIVADYDCDGATACAVGVRGLRLLGAKNVSYLVPDRVVDGYGLTPPIAERVAASGADMLITVDNGIASVEGVAAAKARGLQVLVTDHHLPGPELPLADVLVNPNQPGCEFESKSIAGVGVMFYVLLALRSELRKRGVFDTATQPKLDALLPLVALGTVADVVKLDANNRRLVAQGLRRIRAGAMPAGVAALFKAASRHASAATTFDFGFALGPRINAAGRLADMTLGIECLLTDDAGRAEELARMLDGINRERRDIEGGMRDQALLLAESLFSNGTDGEGIAAPPPAISVFDAGFHEGVVGIVASRIKDRFHRPTFVFAASGAPGKEQELKGSGRSIPGFHLRDALDLVAKRHPGVLLRFGGHAMAAGCTVAREHFETFEKGFAQVARELLADAALTRQIETDGPIAREYMRIDLVDTLHREVWGQGFAPPTFSEEVEVVSQRLVGEKHLSLKLRHQGQPIDAMWFSHTEPLPPRVKLAFRLDADEWQGVRRLRFLVEGAEF*