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SCNpilot_cont_300_bf_scaffold_72_curated_208

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(224381..224962)

Top 3 Functional Annotations

Value Algorithm Source
Stringent starvation protein B n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CQM9_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 87.8
  • Coverage: 197.0
  • Bit_score: 345
  • Evalue 3.10e-92
stringent starvation protein B; K03600 stringent starvation protein B similarity KEGG
DB: KEGG
  • Identity: 87.8
  • Coverage: 197.0
  • Bit_score: 345
  • Evalue 9.80e-93
Stringent starvation protein B {ECO:0000313|EMBL:ACS17855.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.8
  • Coverage: 197.0
  • Bit_score: 345
  • Evalue 4.40e-92

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 582
ATGATCAACGCGCTCGAGTCGTCTTCCACCCGCCCGTACCTTATCCGGGCGCTGTATGAATGGTGCACCGACAACGGGTTCACCCCCTATGTCGCCGTGCAGGTCGACGACACCGTCCAGGTTCCGCGCGAGTACGTGAAGAACGGCGAGATCGTGCTCAACATCAGCTTCGACGCGACCAGCTCGCTCAAGCTCGGCAACGATTTCATCGAGTTCAAGGCCCGTTTCGCGGGCAGTGCGCGCGAAATCAGCGTGCCGGTGGGGCGCGTGATCGCGATCTACGCGCGTGAAAACGGGCAAGGCATGGCGTTTCCCGCGCCGGTGCCCGCCGCTTCCGCGTCGGACAGCGGCAACGGCGAGGTGCCGTCATCGGCACCGTCTTCGCCGCAGGGCCCCGCGCGCATGCCGCTGCGCGATGCCTCGCGCGGCACTGAAGGCGACGCCAGCAAGATCGTCCACCTGGTGACGGGTGATGACGCCGACGAAACGGTAGATGCGGGCCCGGCCACGGACCCTGCCGACGAGCCGCCGCGCCCGCCGGCCGGTGGCGGATCCAGGCCGTCGTTGAAACGCATCAAGTGA
PROTEIN sequence
Length: 194
MINALESSSTRPYLIRALYEWCTDNGFTPYVAVQVDDTVQVPREYVKNGEIVLNISFDATSSLKLGNDFIEFKARFAGSAREISVPVGRVIAIYARENGQGMAFPAPVPAASASDSGNGEVPSSAPSSPQGPARMPLRDASRGTEGDASKIVHLVTGDDADETVDAGPATDPADEPPRPPAGGGSRPSLKRIK*