ggKbase home page

SCNpilot_cont_300_bf_scaffold_72_curated_210

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(225715..226491)

Top 3 Functional Annotations

Value Algorithm Source
Cytochrome c1 n=1 Tax=Variovorax sp. CF313 RepID=J2KIB9_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 95.3
  • Coverage: 258.0
  • Bit_score: 515
  • Evalue 4.00e-143
Cytochrome c1 {ECO:0000313|EMBL:EJL72853.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.3
  • Coverage: 258.0
  • Bit_score: 515
  • Evalue 5.60e-143
putative cytochrome c1 PetC similarity KEGG
DB: KEGG
  • Identity: 92.6
  • Coverage: 256.0
  • Bit_score: 498
  • Evalue 9.30e-139

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 777
ATGAAGAAGAAAAGCATTTCCGGCTGGCTCGCGGTCCTGGGTCTGGCGCTGGGCCTGACCTTCTCCGCAGCCGCGTCGGCCGAGTCCGAAGGCATCGCCTGGGACAAGGCCAACACCAAGACCAACGACATGGCCGCGCTGCAGAACGGCGCCAAGCTGTTCGTCAACTACTGCCTGAACTGCCACTCGGCGGCGTTCATGCGCTACAACCGACTGCAGGACATCGGCATCACCGAGCAGCAGATCAAGGACAACCTTCTGTTCACGACCGACAAGGTCGGCGAAACCATGAAGGCCAACATCGATCCGCGCCAGGCCAAGGACTGGTTCGGCACCACGCCACCCGACCTCACGCTGGTCGCGCGCTCGCGCGCCGGCCACGGCGGCACGGGCGCAGACTACCTCTACACGTATCTGCGCACCTACTACCGCGACGACACAAAAGCCACCGGCTGGAACAACCTTGCGTTCCCCAGCGTCGCCATGCCGAACCCCCTGTGGGAACTGCAAGGCGAACGCCGCCCGGTCTACACCAAGGTCGAACAGCACGGCCACGAAACCGAAGTGTTCAAGGGCTGGGAGCAAGTCACTCCCGGCACCCTGACACCCGTGCAGTACGACAATGCCGTCGGCGACCTGGTGAGTTACCTGCAATGGATGGCCGAGCCGGCTCAGAACACCCGCATCCGCATCGGCGTGTGGGTGCTGCTGTTCCTGGCCATGTCGGTGGTTTTTGTGTGGCGACTGAACGCCTCGTACTGGAAAGACGTCAAGTAG
PROTEIN sequence
Length: 259
MKKKSISGWLAVLGLALGLTFSAAASAESEGIAWDKANTKTNDMAALQNGAKLFVNYCLNCHSAAFMRYNRLQDIGITEQQIKDNLLFTTDKVGETMKANIDPRQAKDWFGTTPPDLTLVARSRAGHGGTGADYLYTYLRTYYRDDTKATGWNNLAFPSVAMPNPLWELQGERRPVYTKVEQHGHETEVFKGWEQVTPGTLTPVQYDNAVGDLVSYLQWMAEPAQNTRIRIGVWVLLFLAMSVVFVWRLNASYWKDVK*