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SCNpilot_cont_300_bf_scaffold_126_curated_16

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(14214..15371)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI00036F679E similarity UNIREF
DB: UNIREF100
  • Identity: 94.0
  • Coverage: 386.0
  • Bit_score: 700
  • Evalue 7.60e-199
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:EJL69517.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.1
  • Coverage: 385.0
  • Bit_score: 700
  • Evalue 1.40e-198
putative extracellular ligand-binding receptor similarity KEGG
DB: KEGG
  • Identity: 89.9
  • Coverage: 386.0
  • Bit_score: 674
  • Evalue 2.40e-191

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1158
ATGACCGTTCCCGTGCCGCGCGAGTCGATTGCGCCGCTTTCCACCAGCCGTCGCCGTGCGCTGACCGGACTGGCCGCAACCGCCGCCGCGGGCCTGGGATTTCCGGCGCTGGCGCAGAACAAGCCGGTTCGCGTCGGGACCACCTTCGACAACAGCAGCGTGGAGAAGGCCAACGGGCAGGGGCTTTACCAGGGTTCGAGCGCTTTCTTCGCGGCGCTGAACAAGGCCGGCGGCATCAACGGCACCAAGGTCGAGCTCGTGATGGCCGACGACACCTTCAAGCCCGATGTGGCCAAGGCCAACGCGCTGGCCTTCGAGAAGGACAGCTCGGTGCTCGCGCTGGTGCACCCGCTGGGCACGCGCCAGACGGCCGAAGTGATGGACGCGGTGCCGGGCATGGCCGTGGTCGGCCCCATCACCGGCACCATCTCGCTGCGCAAGAAGGCGTCGCCCAACACCTTCTGGGTGCGCGCCAACTACGACCAGGAAGTCGACAAGCTGGTGAGCACGGCCGCCGTGCTGGGCCAGAGCCGCATCGGCCTCGTGCACTCGGACGATCCGCTGGGCCAATCGGTGCTGGCCGCGTTCAAGGCCTCGCTGGCCAAGGCCAAGCTGGAGCCGGCGGTGATCGCCACCACGCCCAACACCACCAGCATGGAAGTCGGCCCCGCCGCCGCGGCCATCGCCAAGGCCAAGCCGCAGGTGGTGGTGGTCGGGTTGGCGGGCACGGCGCCGGTGTTCCTGAAGGCGCTGCGCGAGGCGGGCAACAGCAGTTCGGCCTACGGCCTGTCGATCACGGCCAGCGCGCTCGCGGCCATGGGCGACCTGGCGCGCGGCCTGGGCTTCGTGATCGTGGTGCCTTCGCCGTATTCGACCAAGTACGAGATCGTGCGCCGCTACCAGGCCGACATGGTGGCCAGCGGCATCAAGGAGTTCTCGCTCACCAGCCTGGAGGGCTACATGAACGCCGCCGTGCTGGCAGAGGGCATGCGCCGCGCGGGCGGTTCGCTGACGCGCGCGTCGGTGATGTCGGGGCTGGCCAGCATCGAGAGCTTCGACCTGGGCGGGGTGAAGATCAACTACGGCCGCACCAACCGCGAAGGCGGCCAGTTCGTGGACGTGGCCGTGATCGGCAGCCGCGGCCAGATGCTCAGCTAG
PROTEIN sequence
Length: 386
MTVPVPRESIAPLSTSRRRALTGLAATAAAGLGFPALAQNKPVRVGTTFDNSSVEKANGQGLYQGSSAFFAALNKAGGINGTKVELVMADDTFKPDVAKANALAFEKDSSVLALVHPLGTRQTAEVMDAVPGMAVVGPITGTISLRKKASPNTFWVRANYDQEVDKLVSTAAVLGQSRIGLVHSDDPLGQSVLAAFKASLAKAKLEPAVIATTPNTTSMEVGPAAAAIAKAKPQVVVVGLAGTAPVFLKALREAGNSSSAYGLSITASALAAMGDLARGLGFVIVVPSPYSTKYEIVRRYQADMVASGIKEFSLTSLEGYMNAAVLAEGMRRAGGSLTRASVMSGLASIESFDLGGVKINYGRTNREGGQFVDVAVIGSRGQMLS*