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SCNpilot_cont_300_bf_scaffold_656_curated_31

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 29504..29767

Top 3 Functional Annotations

Value Algorithm Source
transposase n=1 Tax=Variovorax paradoxus RepID=UPI0003793711 similarity UNIREF
DB: UNIREF100
  • Identity: 97.7
  • Coverage: 87.0
  • Bit_score: 168
  • Evalue 4.00e-39
transposase orfA protein similarity KEGG
DB: KEGG
  • Identity: 87.2
  • Coverage: 86.0
  • Bit_score: 149
  • Evalue 4.70e-34
Transposase orfA protein {ECO:0000313|EMBL:AEI82951.1}; TaxID=1042878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) (Ralstonia; eutropha).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.2
  • Coverage: 86.0
  • Bit_score: 149
  • Evalue 2.10e-33

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Taxonomy

Cupriavidus necator → Cupriavidus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 264
ATGAAGAAGAGTCGATTTTCAGAAGAACAGATGGTCACGATCCTGCGCGAAGCAGATCGCACGACGGTGGCCGAGGCTGCCAAAAAGCACAGGGTCAGCGACGCCACCATCTACGCCTGGCGCAAGCACTTCGGCCAGATGGAAGCGGCCGACGTCAAGCGCCTGAAGGCACTGGAGCTTGAGAACAGCCGGCTGAAGAAGCTCCTTGCCGAGCGAGATCTGGACCTCGAGATTCTCAAGGAGATCAACGCAAAAAAATGGTGA
PROTEIN sequence
Length: 88
MKKSRFSEEQMVTILREADRTTVAEAAKKHRVSDATIYAWRKHFGQMEAADVKRLKALELENSRLKKLLAERDLDLEILKEINAKKW*