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SCNpilot_cont_300_bf_scaffold_632_curated_5

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(4968..6515)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, IclR family n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q170_ACIAP similarity UNIREF
DB: UNIREF100
  • Identity: 61.3
  • Coverage: 537.0
  • Bit_score: 617
  • Evalue 1.50e-173
IclR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 61.3
  • Coverage: 537.0
  • Bit_score: 617
  • Evalue 4.60e-174
Transcriptional regulator, IclR family {ECO:0000313|EMBL:ADX44075.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.3
  • Coverage: 537.0
  • Bit_score: 617
  • Evalue 2.10e-173

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Taxonomy

Acidovorax avenae → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1548
TTGGAAAAGGCCCTCGACGTGCTCGAGGCGGTAGGCGCGGCGCCTGAGGGTTTGAGCCAGACGGAGCTGGCCGATCGGTTGGCGATCCCGCGTACCACGGTGTATCGCCTGCTCGCCACGCTGGTGACGCGCGGCTTGCTGAGGCGCGACCAGCTGCGCAAGGTGTACTGCCTGGGTTTTCGGTGCTTCGAGATGGCTCGCCAAGCCTATGCGATGCCTGACCTGGTGGCCGCCGCCGCTATCGAGCTCCGTACGTTGCGCGACCTGACCGGCGAGACCTCCTATCTTGCAGCTCTGGACGGCCGCGAGGTCATTTCGCTCGAGCGCTGCGATGGGGCACACAGCCGGCGCTCGCAGGCTGCGCTCGGGCAGCGCAAACCCATCCATTGCACCAGTCAAGGCAAAGCCATCCTGTCCGTGCTCGACGAGAGTGCTCGCGAGGCCCTGATACGCGAGCTGAATCTCAAGCCGCTCACGCAGCACACCATCACCGACCGACGACGGCTGCAGGCCGAACTCAAGGTGACGGCCGCACGCGGCTATGCCATCGACGACGAGGAGATCGTGCTGGGCGTGCGATGTGTCGGTGCGCCGATTGTCGACACCAATGGACGGGTGCGGGGCGCGATCAGCGTGGCTGGGCCCGCCTACCGGCTCACACCCGACCGCCTTCAACTGCTGGGGCCCGAACTTGCCGACGCGGCACGCCGGGTCGGTGCCCAGTTGCATCCCGAGGCCGCCACTGTCCCGAATGGCGCAGCAGAGCCTGTACCCGGTCACTGGGCGTTTCACGGCGCCTACCCCCTTTGGGACTCGCGGAATCAGTGCCTGTACTGGGCCGACAGGCTTGCGCCCGCGGTGCACTGCACACTGGGGGGCGTCGACACTGTGCACGCCTCGTTCGAGCAGCCGATCGTCGCCTTGGTGCAGCGCGATGATGCCGTCTGCGCCGTGGTGGGAGAAGCCATGGTGGCCATTGACCCGGACGGTTCGACCCGGTCCGTAGACCAACCGATTCCTTCCGGCCTGCGTGCGTTGTGCGATGAAGCCGGCGGTCCTCTCTGGGCTGCGGTGGAGCAAGCCGGCGTCACGGTGATTGGACAGTTGCAGTCAGATGGAGGCATCAACGTCCAGTGGCGCGTGAGCGAGGCCGTGCAGTGCCTCAAATGGCGCTCGGAAGATGCCACTCTTTTCGCAGCAGCGCCCGACACCGGCAGCATTCTCATGCTCAAGCCTGGCACACCAGGCGTGCGTCGACTGGCCACCATTCCCAAAGGTTCCGGCTCGGTGAGCGGCTTGGCCTTCGATAGCGAAGGCGGCATCTGGACATGTCTGCAAGGTGGTTGGGGAGTGGTGCGCTTCGCGGCCGATGGCGGTCTGGACAGGGTGGTGGGGCTGCCCGTGCCCTGCCCGACCGACCTGGCCTTCGACGGCCAGTTCTCCAGCCTATACGTCGCTACGGCGCGCCAGTCCGTGAGCCTCGAAGTGCTCAACGACGCGCCTTTGTCGGGGAGGCTTTTCAGGATTGCGGGTGGCAGCCCGAACTGA
PROTEIN sequence
Length: 516
LEKALDVLEAVGAAPEGLSQTELADRLAIPRTTVYRLLATLVTRGLLRRDQLRKVYCLGFRCFEMARQAYAMPDLVAAAAIELRTLRDLTGETSYLAALDGREVISLERCDGAHSRRSQAALGQRKPIHCTSQGKAILSVLDESAREALIRELNLKPLTQHTITDRRRLQAELKVTAARGYAIDDEEIVLGVRCVGAPIVDTNGRVRGAISVAGPAYRLTPDRLQLLGPELADAARRVGAQLHPEAATVPNGAAEPVPGHWAFHGAYPLWDSRNQCLYWADRLAPAVHCTLGGVDTVHASFEQPIVALVQRDDAVCAVVGEAMVAIDPDGSTRSVDQPIPSGLRALCDEAGGPLWAAVEQAGVTVIGQLQSDGGINVQWRVSEAVQCLKWRSEDATLFAAAPDTGSILMLKPGTPGVRRLATIPKGSGSVSGLAFDSEGGIWTCLQGGWGVVRFAADGGLDRVVGLPVPCPTDLAFDGQFSSLYVATARQSVSLEVLNDAPLSGRLFRIAGGSPN*