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SCNpilot_cont_300_bf_scaffold_632_curated

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_632_curated_1
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59..973
DNA (915bp) protein (305aa)
Mannonate dehydratase {ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|SAAS:SAAS00189414};; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
mannonate dehydratase; K01686 mannonate dehydratase [EC:4.2.1.8]
AP endonuclease, family 2 n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A2I9_9PROT
SCNpilot_cont_300_bf_scaffold_632_curated_2
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1202..2038
DNA (837bp) protein (279aa)
MFS transporter n=1 Tax=Rhizobium radiobacter RepID=UPI000370F1B1
Uncharacterized protein {ECO:0000313|EMBL:KGH08244.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_632_curated_3
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2054..3784
DNA (1731bp) protein (577aa)
Dihydroxy-acid dehydratase {ECO:0000313|EMBL:KGH08243.1}; EC=4.2.1.9 {ECO:0000313|EMBL:KGH08243.1};; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
dihydroxy-acid dehydratase (EC:4.2.1.9); K01687 dihydroxy-acid dehydratase [EC:4.2.1.9]
Dihydroxy-acid dehydratase n=1 Tax=Advenella kashmirensis W13003 RepID=V8QP93_9BURK
SCNpilot_cont_300_bf_scaffold_632_curated_4
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3819..4796)
DNA (978bp) protein (326aa)
LacI family transcription regulator protein n=1 Tax=Herbaspirillum frisingense GSF30 RepID=R0G701_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KJK16197.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;"
LacI family transcription regulator protein; K06145 LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
SCNpilot_cont_300_bf_scaffold_632_curated_5
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4968..6515)
DNA (1548bp) protein (516aa)
Transcriptional regulator, IclR family n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q170_ACIAP
IclR family transcriptional regulator
Transcriptional regulator, IclR family {ECO:0000313|EMBL:ADX44075.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
SCNpilot_cont_300_bf_scaffold_632_curated_6
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6699..7523
DNA (825bp) protein (275aa)
Demethylmenaquinone methyltransferase n=1 Tax=Pseudomonas sp. GM102 RepID=J2VHF1_9PSED
Demethylmenaquinone methyltransferase {ECO:0000313|EMBL:KGH08231.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
Demethylmenaquinone methyltransferase
SCNpilot_cont_300_bf_scaffold_632_curated_7
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7554..8003
DNA (450bp) protein (150aa)
Ketosteroid isomerase-like protein n=1 Tax=Pseudomonas sp. GM102 RepID=J3E1H1_9PSED
Ketosteroid isomerase {ECO:0000313|EMBL:KGH08232.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_632_curated_8
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8006..9442
DNA (1437bp) protein (479aa)
aldehyde dehydrogenase; K14519 NADP-dependent aldehyde dehydrogenase [EC:1.2.1.4]
Aldehyde Dehydrogenase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T8E3_ACIDE
Aldehyde dehydrogenase {ECO:0000313|EMBL:KGH08233.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
SCNpilot_cont_300_bf_scaffold_632_curated_9
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9439..9732
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Pseudomonas putida RepID=UPI0003712BE0
Stress protein {ECO:0000313|EMBL:KGH08234.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_632_curated_10
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9739..10269)
DNA (531bp) protein (177aa)
malate/L-lactate dehydrogenase (EC:1.1.1.27); K00016 L-lactate dehydrogenase [EC:1.1.1.27]
Putative malate/L-lactate dehydrogenase n=1 Tax=Bordetella bronchiseptica 253 RepID=K4QPL1_BORBO
Lactate dehydrogenase {ECO:0000313|EMBL:KGH08235.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
SCNpilot_cont_300_bf_scaffold_632_curated_11
Advenella mimigardefordensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11339..12184
DNA (846bp) protein (282aa)
Gluconolactonase {ECO:0000313|EMBL:AHG64077.1}; EC=3.1.1.17 {ECO:0000313|EMBL:AHG64077.1};; TaxID=1247726 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella mimigardefordensis DPN7.;"
gluconolactonase; K01053 gluconolactonase [EC:3.1.1.17]
gluconolactonase n=1 Tax=Pseudomonas sp. 313 RepID=UPI0002E3A749
SCNpilot_cont_300_bf_scaffold_632_curated_12
Pseudomonas batumici, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12206..13318
DNA (1113bp) protein (371aa)
hypothetical protein; K07404 6-phosphogluconolactonase [EC:3.1.1.31]
Uncharacterized protein n=1 Tax=Pseudomonas viridiflava UASWS0038 RepID=K6AE95_PSEVI
6-phosphogluconolactonase {ECO:0000313|EMBL:KIH84682.1}; TaxID=226910 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas batumici.;"
SCNpilot_cont_300_bf_scaffold_632_curated_13
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13396..14391)
DNA (996bp) protein (332aa)
Serine/threonine dehydratase {ECO:0000313|EMBL:KGH08236.1}; EC=4.3.1.19 {ECO:0000313|EMBL:KGH08236.1};; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
serine/threonine dehydratase; K01754 threonine dehydratase [EC:4.3.1.19]
Bordetella petrii strain DSM 12804, complete genome n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I8E8_BORPD
SCNpilot_cont_300_bf_scaffold_632_curated_14
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14388..15587)
DNA (1200bp) protein (400aa)
Mandelate racemase n=1 Tax=Klebsiella oxytoca E718 RepID=I6WPN5_KLEOX
MdlA {ECO:0000313|EMBL:KGH08237.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
mandelate racemase
SCNpilot_cont_300_bf_scaffold_632_curated_15
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15627..16604)
DNA (978bp) protein (326aa)
Uncharacterized protein UPF0065 n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VMY1_POLNA
Uncharacterized protein {ECO:0000313|EMBL:KGH08238.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_632_curated_16
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16762..18348)
DNA (1587bp) protein (529aa)
D-galactarate dehydratase/altronate hydrolase family protein 3 (EC:4.2.1.-); K01685 altronate hydrolase [EC:4.2.1.7]
Altronate dehydratase n=1 Tax=Pseudomonas sp. GM102 RepID=J2MDV5_9PSED
Galactarate dehydratase {ECO:0000313|EMBL:KGH08239.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
SCNpilot_cont_300_bf_scaffold_632_curated_17
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18408..19706)
DNA (1299bp) protein (433aa)
uxaA; altronate hydrolase (EC:4.2.1.7); K01685 altronate hydrolase [EC:4.2.1.7]
Altronate dehydratase n=1 Tax=Pseudomonas sp. GM102 RepID=J3E1G4_9PSED
Galactarate dehydratase {ECO:0000313|EMBL:KJK16168.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;"
SCNpilot_cont_300_bf_scaffold_632_curated_18
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19927..20901
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Herbaspirillum lusitanum RepID=UPI0002F65372
Uncharacterized protein {ECO:0000313|EMBL:KGH08241.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
LacI family transcription regulator protein; K06145 LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
SCNpilot_cont_300_bf_scaffold_632_curated_19
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20921..22270)
DNA (1350bp) protein (450aa)
hypothetical protein n=1 Tax=Rhizobium radiobacter RepID=UPI00035D592B
Glucarate transporter {ECO:0000313|EMBL:KGH08337.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
exuT; glucarate transporter; K03535 MFS transporter, ACS family, glucarate transporter rbh
SCNpilot_cont_300_bf_scaffold_632_curated_20
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22638..23495
DNA (858bp) protein (286aa)
NAD-dependent dehydratase n=1 Tax=Rhizobium radiobacter RepID=UPI00035D7D66
NAD-dependent dehydratase {ECO:0000313|EMBL:EPR21163.1}; TaxID=1336745 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter DSM 30147.;"
NAD-dependent epimerase/dehydratase
SCNpilot_cont_300_bf_scaffold_632_curated_21
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23492..24589
DNA (1098bp) protein (366aa)
hypothetical protein n=1 Tax=Rhizobium radiobacter RepID=UPI0003613192
Uncharacterized protein {ECO:0000313|EMBL:EPR21277.1}; TaxID=1336745 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter DSM 30147.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_632_curated_22
unknown

Not on your lists

comp(24683..24808)
DNA (126bp) protein (42aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_632_curated_23
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24937..25368
DNA (432bp) protein (144aa)
phenylacetic acid degradation protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037E687B
Uncharacterized protein {ECO:0000313|EMBL:GAD21113.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
thioesterase superfamily protein
SCNpilot_cont_300_bf_scaffold_632_curated_24
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25898..26707)
DNA (810bp) protein (270aa)
IstB domain protein ATP-binding protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CWJ4_VARPS
IstB domain-containing protein ATP-binding protein
IstB domain protein ATP-binding protein {ECO:0000313|EMBL:ACS18749.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
SCNpilot_cont_300_bf_scaffold_632_curated_25
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26700..28211)
DNA (1512bp) protein (504aa)
Integrase catalytic region n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CWJ3_VARPS
integrase catalytic subunit
Integrase catalytic region {ECO:0000313|EMBL:ACS18748.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
SCNpilot_cont_300_bf_scaffold_632_curated_26
unknown

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29681..29863
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_632_curated_27
unknown

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29930..30577
DNA (648bp) protein (216aa)

This feature has no annotations

Displaying 27 items

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