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SCNpilot_cont_300_bf_scaffold_632_curated_25

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(26700..28211)

Top 3 Functional Annotations

Value Algorithm Source
Integrase catalytic region n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CWJ3_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 94.2
  • Coverage: 503.0
  • Bit_score: 968
  • Evalue 2.00e-279
integrase catalytic subunit similarity KEGG
DB: KEGG
  • Identity: 94.2
  • Coverage: 503.0
  • Bit_score: 968
  • Evalue 6.10e-280
Integrase catalytic region {ECO:0000313|EMBL:ACS18748.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.2
  • Coverage: 503.0
  • Bit_score: 968
  • Evalue 2.70e-279

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1512
ATGGACATGATTGGCAAGATCCGACGGCTGCACGCGAGGGACAAGCTGTCGGAGCGCGAGATAGCGCGCAGGACGGGGCTGTCTCGCAACACGGTGTCGAAGTGGCTGCGCGCACCAGTGAAGGAGGCGCCGAAGTACCGGCGCGAGCCGCGCCCGAACAAGCTCAGCCCGTTTGAGGAAGCGCTCAAGCAGGCATTGACGGCCGATGCGCGGCGGCCCAAGCACGAGAGGCGAACGGCACGTGCGCTGCACGCCGAGATCAAGGCGGCGGGCTACGACGGCGGTTACTCGGCCGTCACTGACTTCATTCGAGCCTGGCGCCAGGGTGAGGGACAGGCAGTCAACGTCACGGCGTTCGTGCCGCTGAACTTCGAGCTCGGTGAGGCCTTCCAGTTCGATTGGAGCGAAGAGGGCCTGGTCGTCGGCGGCATCTACTACCGTGTGCAGGTGTCGCACCTGAAGCTGTGCGCGAGCCGTGCGTTCTGGCTGGTGGCATACCCGAGCCAAGGCCACGAGATGCTGTTCGACGCCCACACGAGGTCGTTCGCAGCGTTGGGCGGTGTGGCGCGCCGCGGGATCTACGACAACATGCGCACCGCCGTCGACAAGGTTCACAAGGGCAAGGGCCGCACCGTCAATGCCCGCTTCGCCGTGATGTGCGCGCACTACCTGTACGACCCCGACTTCTGCAACGTAGCCTCCGGCTGGGAGAAGGGGCGCGTGGAGAAGAACGTGCAGGACAGTCGTCGACGCATCTGGATCGAGGCGGGCCAGCGCCGCTTCGGCTCCTTCGTCGAACTCAATGCATGGTTGGGCGAGCGCTGCCGGTCCTTGTGGAGTGAGATCCGCCATCCCGAGCACGGCCAGTTCAGCGTGGTCGAGATGCTCGAGCACGAGCGGCCCCACCTGATGCCCATGCCCGAGCCCTTCGACGGCTACGTGGAGAAGCCGGCACGGGTGTCGAGCACCTGCCTGGTGTCGGTGGCACGCAATCGCTACTCGGTGCCATGCGAACTGGCCGGGCAGATGGTCAGCACGCGGCTGTACCAAGGCAACGTCGTGGTGGTCGCAGAAGATGCGGCAGTGGCGCGCCACGAGCGCCTGAGCGCCTCTGGCGGCACCCGCTACGACTGGCAACACTACATCCCGCTCGTCCAGCGCAAGCCTGGTGCATTGAGGAACGGTGCGCCCTTCGCAGACATGCCCGAGGCGCTGCAGCGACTGCGCCGCGGCCTGCTGCGCCAGGCCGGTGGAGACCGCGTGATGGCTCAGGTGTTGGCCATCGTGCCGACGGCGGGACTGGATGCGGTGATCGTGGCGGTCGAGTTGGCACTGGAGAGTGGTCCGCCATCGGGCCGGGTCAGCGTAGAGCACGTCGTCAATGTGCTTGGCCGGCTCACCGCGCCGGCAGCTGCGCAAAGTGCCGAGACGGCGCTGCAGATCGTCACGCCGCCGCTGGCCAACACGGCGCGCTACGACAGCCTGCGCGGACAGGAGGTGGACCATGCGTGA
PROTEIN sequence
Length: 504
MDMIGKIRRLHARDKLSEREIARRTGLSRNTVSKWLRAPVKEAPKYRREPRPNKLSPFEEALKQALTADARRPKHERRTARALHAEIKAAGYDGGYSAVTDFIRAWRQGEGQAVNVTAFVPLNFELGEAFQFDWSEEGLVVGGIYYRVQVSHLKLCASRAFWLVAYPSQGHEMLFDAHTRSFAALGGVARRGIYDNMRTAVDKVHKGKGRTVNARFAVMCAHYLYDPDFCNVASGWEKGRVEKNVQDSRRRIWIEAGQRRFGSFVELNAWLGERCRSLWSEIRHPEHGQFSVVEMLEHERPHLMPMPEPFDGYVEKPARVSSTCLVSVARNRYSVPCELAGQMVSTRLYQGNVVVVAEDAAVARHERLSASGGTRYDWQHYIPLVQRKPGALRNGAPFADMPEALQRLRRGLLRQAGGDRVMAQVLAIVPTAGLDAVIVAVELALESGPPSGRVSVEHVVNVLGRLTAPAAAQSAETALQIVTPPLANTARYDSLRGQEVDHA*