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SCNpilot_cont_300_bf_scaffold_455_curated_7

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 5768..7198

Top 3 Functional Annotations

Value Algorithm Source
dead/deah box helicase domain-containing protein; K05591 ATP-independent RNA helicase DbpA [EC:3.6.4.13] similarity KEGG
DB: KEGG
  • Identity: 93.7
  • Coverage: 478.0
  • Bit_score: 869
  • Evalue 4.80e-250
DNA/RNA helicase, superfamily II n=1 Tax=Variovorax sp. CF313 RepID=J3CWI5_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 95.8
  • Coverage: 474.0
  • Bit_score: 891
  • Evalue 2.90e-256
DNA/RNA helicase, superfamily II {ECO:0000313|EMBL:EJL79676.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.8
  • Coverage: 474.0
  • Bit_score: 891
  • Evalue 4.00e-256

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1431
ATGACCACACCCAATCCCACAGCCGGCGGCACCCCAGCCGACAACGGCTTTGCCGCACTGGCGCTCTCGCCCCAGATGCTGGCCAACCTCACCCAGCTCGGCTACACGCAGATGACGCCGATCCAGGCGGCCGCGCTGCCGCCGGCGCTGCTCGGCAAGGACCTGATCGCGCAGGCCAAGACCGGCAGCGGCAAGACCGCCGCCTTCGCGCTGGCGCTGCTGGCCAACCTCAACGCCCGCCGCTTCGCCATCCAGGCGATGGTGCTGTGCCCGACGCGCGAGCTGGCCGACCAGGTCACGACCGAGATCCGCCGCCTGGCGCGAGCCGAGGAAAACATCAAGGTCGTCACGCTCTGCGGCGGCGTCGCGCTGCGCGGGCAGGTCGCCAGCCTGGAGCACGGCGCGCACATTGTGGTCGGCACGCCGGGCCGGATCATGGACCACCTGGAACGCGAGAACCTCGACCTGTCGGCGCTCAACACGCTGGTGCTCGACGAAGCCGACCGCATGCTGGACATGGGCTTCTTCGACGACATCGTGACGGTGGCGCGCCAGTGCCCGAAGGAGCGCCAGACGCTGCTGTTCTCGGCCACATACCCAGAAGGCATCGCCAAGCTCGCGCAGCAGTTCATGAAGAACCCCGAGCAGATCACGGTGCAGGCGCAGCACGAGGGCAGCAAGATCCGCCAGCGCTGGTACCAGATCAAGGACAGCGAGCGGCTGCACGCCGTGAGCCTGCTGCTCGACCATTTCCGCCCCGTCAGCACGCTGGCCTTCTGCAACACCAAGCAGCAGTGCCGCGACCTCGTCGACGTGCTGCAGGCGCAGGGCTTCAGCGCGCTGGCCCTCTTCGGCGAACTGGAGCAGCGCGAGCGCGACCAGGTGTTAGTGCAGTTCGCCAACCGCAGCTGCTCGGTGCTGGTGGCCACCGACGTGGCGGCGCGCGGGCTCGACATTTCGCAGCTCGAGGCGGTGATCAACGTCGACGTGACGCCCGACTCCGAAATCCACATCCACCGTGTCGGTCGCACCGGCCGCGTGGGGCAGCAAGGCGCCGCTGAAGGCCTGGCGCTGAACCTGGCCAGCATGAACGAGATGGGCTTTGTCGGGAAGATCGAGCAGCTGCAGGGCCGTGAATCCGAATGGCACGAGCTGTCCGAACTCACGCCGGGCAAGGGCTCGCCGCTGAAGCCGCCGATGGCCACGCTGCAGATCGTGGGCGGGCGCAAGGAAAAGATCCGCGCCGGCGACGTGCTGGGCGCGCTGACGGGCGACTGCGGCTACGCGAAAGACCAAGTCGGCAAGATCAACGTCAACGAGTTCTCGACCTATGTGGCGGTCGACCGCGCCATCGCCGCCGAGGCGGCGCGCAAGCTGTCCAGCGGCCGCGTCAAGGGCAAGTCGGTCAAGGTGCGGCTGCTGGAGCAGTAA
PROTEIN sequence
Length: 477
MTTPNPTAGGTPADNGFAALALSPQMLANLTQLGYTQMTPIQAAALPPALLGKDLIAQAKTGSGKTAAFALALLANLNARRFAIQAMVLCPTRELADQVTTEIRRLARAEENIKVVTLCGGVALRGQVASLEHGAHIVVGTPGRIMDHLERENLDLSALNTLVLDEADRMLDMGFFDDIVTVARQCPKERQTLLFSATYPEGIAKLAQQFMKNPEQITVQAQHEGSKIRQRWYQIKDSERLHAVSLLLDHFRPVSTLAFCNTKQQCRDLVDVLQAQGFSALALFGELEQRERDQVLVQFANRSCSVLVATDVAARGLDISQLEAVINVDVTPDSEIHIHRVGRTGRVGQQGAAEGLALNLASMNEMGFVGKIEQLQGRESEWHELSELTPGKGSPLKPPMATLQIVGGRKEKIRAGDVLGALTGDCGYAKDQVGKINVNEFSTYVAVDRAIAAEAARKLSSGRVKGKSVKVRLLEQ*