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SCNpilot_cont_300_bf_scaffold_455_curated_20

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(17974..18711)

Top 3 Functional Annotations

Value Algorithm Source
Surface antigen family protein n=1 Tax=Variovorax sp. CF313 RepID=J2TM55_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 81.0
  • Coverage: 247.0
  • Bit_score: 388
  • Evalue 4.10e-105
Surface antigen family protein {ECO:0000313|EMBL:EJL79662.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.0
  • Coverage: 247.0
  • Bit_score: 388
  • Evalue 5.70e-105
17 kDa surface antigen similarity KEGG
DB: KEGG
  • Identity: 51.9
  • Coverage: 258.0
  • Bit_score: 199
  • Evalue 1.40e-48

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 738
ATGGACTCGACATCGCCCCTCAACCAGCCTCCCGGAACTCCGGCCGCCAGATCGCCGAAGGCACTGTGGGCCGTGATCGGCGCGCTGGCGGTGGCCGTGGTCGCGCTGGGCGGTGTGCTGTTGCACAAGCAGTCGCAGGACACGGCGACGAGCGCCGCGGCCTCCCCACCGGTGGCCGCCGCGATGGCGCCCAAGGCGCCCGACGACTTCAAGCCTGAGCTCATGCCGCCCGCGCCCGCCGTGCCGCCTGCCAGTGCCGGGCCGGCCCCGCAGGCGATGGCTGCCGCGCCCATGCCTGCTCCCGCGCCTGCCCCGCTGCCGGCACAGGCTATCCAGCCCGGGCCCGCACCCGGTGCCAACGCCCCGGTGGTGGCCGCCGCCACGCCCGCACCGCCGCCTTGCGCGGTCTGCGGCCGGGTCGAATCCGTCCGGGCGGTGCAGCGCGCCCAGAAAACCACCGGCGTCGGCGCGGTTGCGGGCGGCGTGGTGGGCGGCCTCGTCGGCAACCAGTTCGGCCACGGCCACGGCCGTGCCGCGACCACCGTGCTCGGCGCGGTCGGCGGCGGCTTCGCGGGCAACGCCATCGAGAAGCACGTGCGCACGGTCACCGTCTACGAGGTTGGCGTGCGCATGGATAACGGCTCCCTGCGCACGGTGGAGACCAAGAGCGCGCCGCCCATCGGCAAGCCGGTCACGCTCCGGCGCGGCGTGCTGCGTCCGGCGGACGGCCGCAAGTAG
PROTEIN sequence
Length: 246
MDSTSPLNQPPGTPAARSPKALWAVIGALAVAVVALGGVLLHKQSQDTATSAAASPPVAAAMAPKAPDDFKPELMPPAPAVPPASAGPAPQAMAAAPMPAPAPAPLPAQAIQPGPAPGANAPVVAAATPAPPPCAVCGRVESVRAVQRAQKTTGVGAVAGGVVGGLVGNQFGHGHGRAATTVLGAVGGGFAGNAIEKHVRTVTVYEVGVRMDNGSLRTVETKSAPPIGKPVTLRRGVLRPADGRK*