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SCNpilot_cont_300_bf_scaffold_455_curated_22

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(20122..20583)

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J2KHJ4_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 75.5
  • Coverage: 159.0
  • Bit_score: 219
  • Evalue 2.00e-54
Putative transcriptional regulator {ECO:0000313|EMBL:EJL79660.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.5
  • Coverage: 159.0
  • Bit_score: 219
  • Evalue 2.90e-54
XRE family transcriptional regulator; K15773 HTH-type transcriptional regulator, antitoxin HipB similarity KEGG
DB: KEGG
  • Identity: 63.1
  • Coverage: 176.0
  • Bit_score: 195
  • Evalue 1.70e-47

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 462
ATGGACTATCCCCTGCGCTTCGTCGACCAGCTGCGGCCCCACCTCAAGGCCCTACGGAAGCAGCGCGGCCTGACGCAAGCGCAGGCCGGTGCCCTCATTGGCGTCAGCCAGGCCCGCGTCGCGGAAATCGAAGCGAACCCCGGCGCGGTCAGCTTCGAGCAGCTGATGAAGCTGCTGTCGGCGCTGGGGGCATCCTTCTGCTTGCGCGACGAAGCGGTGCCCGGCGGCGTGCTCGTCGCCGCGGAAGAGCCCGCGCTGTACGACGCCGTGAAGCTCCCGCCCGGCCCGTGGACCGCCACGCAGATGAGCGACCAGTCGGTGCTGGTGCGCCTTGAAGAATCCGAATCGCCGGGCGCGCCGGGCGAATCGCTTCGCGCGCTGCAGGCGCTGAACCCCGGCAAGGACATCAAGCCCACGTCGCGCAGGAGCTTCGTCGTGCGGCCGAAGAGGGAGTCCTGGTGA
PROTEIN sequence
Length: 154
MDYPLRFVDQLRPHLKALRKQRGLTQAQAGALIGVSQARVAEIEANPGAVSFEQLMKLLSALGASFCLRDEAVPGGVLVAAEEPALYDAVKLPPGPWTATQMSDQSVLVRLEESESPGAPGESLRALQALNPGKDIKPTSRRSFVVRPKRESW*