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SCNpilot_cont_300_bf_scaffold_224_curated_22

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(27007..29610)

Top 3 Functional Annotations

Value Algorithm Source
Pentapeptide repeat protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CUW0_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 56.7
  • Coverage: 878.0
  • Bit_score: 958
  • Evalue 5.90e-276
pentapeptide repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 56.7
  • Coverage: 878.0
  • Bit_score: 958
  • Evalue 1.90e-276
Pentapeptide repeat protein {ECO:0000313|EMBL:ACS20396.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.7
  • Coverage: 878.0
  • Bit_score: 958
  • Evalue 8.30e-276

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2604
ATGAAGATCGTCAAGCCCTTCCGACTGAGCGTGCTGACGCGGCCGCAGCGCTGGCGCGGCAACGACATGCTCGGTGTGGCGGTGCTGGCGCTGGCGAGCCTGGAAGACGAACCCAGGCTGATGCCCGAGCAGGAGCTCTGGCAGGCGGCGGCCGAGGACATCGGCCCGGGCAACATCCTCGACCTGGGCATGCCCAAGCACGAGCCCGAGTGGCTCGCCAGCGGCCATGCCTATACCGCCCACCAGGCCGACAAGACGATGTGCGCGGTGAAGATGGCCGTGGCGGGCAGCGAGAAGCGCCTGCACGTGTCGGGCGACCGCTACTGGCTCGACGGCCGCATCACGCCGCCCCAGCCCTTCGACAGCATGCCGCTCGACTGGGCGCATGCGTACGGCGGCGCGTCGGTGCCGCAGAACCCGCAGGGCATCGGCAGCGTCGACGAGCTCGTCAACGGCGTGCGCACGCGCCGGCTGCCGAACGTGGAGTCGCCCGACGCCCGCATGTCGGCGCCCGGGCGCGCCGTGCGGCCCGCGAGCCTGGGCGCGATCCCGCCCGACTGGCCGCAGCGCGCGCAGTTGCTCGGCAGCTCCTATGGCCAGCAATGGCTGCAGACGCAGTACCCCGGTCCCGCCGATGACATGGACTGGCGCTACTTCAACGCCGCGCCGCCCGAGCAGCGCTGGCCCGGCATGCAGGAACTGCCCGCCGGCGCGCCCTACGAGATCTGGAACATGCACCCGGACGAGCCGGTGCTGCAAGGCGCGCTGCCGCGCTGGCGCACGCGCTGCTTCGCGAGCTGGCAGGCCGACGGCAGCGAGCTGCGGGAAACGCCGCTGCGCCTGAGCACCGCGTGGTTCTTTCCGCATCGCCGGCGCGTGATCCTGATCTGGCACGGCAGCTTCGCGATTGCGGAAGACGACGCCGCCGACATGAAGCACATCATGCCGGCGCTCGAACTCGAGAACGAGCCGCGGCCGCACGCGCACTACCAGTCGGTGCTGCGGCTGCGGCTGGACCCGAAGTCCGCCGTCCATGCGGTGCGCGACAGCGACCTCGTGCCCAAGGCCGTCATGGGCGCCTGGGCGGGCGACCGGCTGCCGGACGCTTCCACCAAGCCGTCGGTGCGCAACCAGCGTGCCGGCCAGCTGCGCGCGCACGAACACGAGCGCGCCCGGCTGTTGGGCGAGGGGCTCGACCCCGACAAGCTGCTGCCGCAGCCGGTGAAGATCGAAGGCTCCTTCACGCTCGACGACCTGCCCGAGTACAGCGAGCGCATGGAAGCGGAGATCGCCCGCACGCGCGAGGACCTCAAGACGCGCACCGAGCAGGCCGTCGCCGCGTCGCGGCACGACGGCAGCTCGCCGCCCGGGGCGCCGCAGCGCAACCGCTTCGATCCCGACAAGGTGATCGCCGAACTCGCGCAGCTCGAGGCGTTCGGCGAACAGGCGCGACTGCTCCCGCCCGAAGCGCAGGCCGGTGCCCGGGCGGAAGCCGCGCAGGCGCGCGAACGCATGGCCGCGCAGATCCGCCAGGGGCACCTGTACACCGCGCACCTGCTCGACGCCGCGCCGCCCGCGTCGAGCTTTCGCACTGCCAAGCTGCGGCGCCGCCTGGGCCGCGCCGAAGCCGGCCAGCGCAACTTCGCGCGCATGAACCTGATCGGCGCCGACCTGTCGGACATGGACCTGAGCGGCGCCGACTTCACCGGCGCCAACCTCGAGGACGCCAACCTGCAGGGCGCGCGGCTCGCGGGCTGCAACTTTACGCAGGCGGTGCTGGCGCGCGCGCGGCTGGAGCGCGCGGTGCTTGCCGACTGCCGCTTCGACCACGCCAACCTGGGCGCGGCCCTGTGCGACGGCGCCGACTTCAGCCGCGCCAGCCTGCGCCATGCGAACTGCAGCAAGACCGTCTTCCGCGCCTGCGCCATGGGCTCGGCTGTGTTCGAGGCGACCCATGTGCACGAGAGCGTCTGGCAGCGGTGCGACCTGCGGCAGTCCCGCTGGCTGCAGGTAGCCATGATCAAGATGCGCTTCGAGGACGTGTCGTTCGAGGAAGCGTCGTTCCGCCAAATGGGCTGGATCGAGTGCGCGCTGGTTGGCGTGTCGTTCGCGCGCGCCACGCTCGAGGGCTGCGGCTTCACCAGGTTGGCCGGAAACGAAGGGCTGGACTTCACCGGCGCCACGCTGGTTTCGAGCAGCTTCGGGTACCACAGCTCGCTGGCCGGCGCGGTGCTGCGCGACGCGGTGCTCAGGCACTGCGGCCTGCGCGGCGTGACGCTGGCCGGGGCCGACCTGCGCGGCGTGCGGCTCGAAGGCTGCGACTTCTCCGGCTGCGACCTGCGCGGCGCGAAGCTAGATCGGCTGGTTGGCGGAGAGAGCCTCTTCATCCGCACCGACTTCACCGGCGCCTCGCTGGCGGGGGCGGATTTCATCGACAGCAACCTGTCGAAGTCCGACCTGCGGCTGGCCGACCTGCACGACGCCAACCTGTTCCGCGCCGACGTGTCGCAAGCCTTCATCGACGGCACGACACGCCTGGACGGCGCCTATACCCACCATGCCAAGGTGCTGCCCGCCCGGCGCGCCGGACCCGACGATCGATGA
PROTEIN sequence
Length: 868
MKIVKPFRLSVLTRPQRWRGNDMLGVAVLALASLEDEPRLMPEQELWQAAAEDIGPGNILDLGMPKHEPEWLASGHAYTAHQADKTMCAVKMAVAGSEKRLHVSGDRYWLDGRITPPQPFDSMPLDWAHAYGGASVPQNPQGIGSVDELVNGVRTRRLPNVESPDARMSAPGRAVRPASLGAIPPDWPQRAQLLGSSYGQQWLQTQYPGPADDMDWRYFNAAPPEQRWPGMQELPAGAPYEIWNMHPDEPVLQGALPRWRTRCFASWQADGSELRETPLRLSTAWFFPHRRRVILIWHGSFAIAEDDAADMKHIMPALELENEPRPHAHYQSVLRLRLDPKSAVHAVRDSDLVPKAVMGAWAGDRLPDASTKPSVRNQRAGQLRAHEHERARLLGEGLDPDKLLPQPVKIEGSFTLDDLPEYSERMEAEIARTREDLKTRTEQAVAASRHDGSSPPGAPQRNRFDPDKVIAELAQLEAFGEQARLLPPEAQAGARAEAAQARERMAAQIRQGHLYTAHLLDAAPPASSFRTAKLRRRLGRAEAGQRNFARMNLIGADLSDMDLSGADFTGANLEDANLQGARLAGCNFTQAVLARARLERAVLADCRFDHANLGAALCDGADFSRASLRHANCSKTVFRACAMGSAVFEATHVHESVWQRCDLRQSRWLQVAMIKMRFEDVSFEEASFRQMGWIECALVGVSFARATLEGCGFTRLAGNEGLDFTGATLVSSSFGYHSSLAGAVLRDAVLRHCGLRGVTLAGADLRGVRLEGCDFSGCDLRGAKLDRLVGGESLFIRTDFTGASLAGADFIDSNLSKSDLRLADLHDANLFRADVSQAFIDGTTRLDGAYTHHAKVLPARRAGPDDR*