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SCNpilot_cont_300_bf_scaffold_415_curated_17

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(18042..19016)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q122U8_POLSJ similarity UNIREF
DB: UNIREF100
  • Identity: 65.4
  • Coverage: 301.0
  • Bit_score: 410
  • Evalue 1.70e-111
LysR family transcriptional regulator {ECO:0000313|EMBL:GAO27471.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.8
  • Coverage: 310.0
  • Bit_score: 534
  • Evalue 1.10e-148
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 65.4
  • Coverage: 301.0
  • Bit_score: 410
  • Evalue 5.40e-112

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Taxonomy

Alicycliphilus sp. B1 → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 975
ATGGACCGGATTCAAGCGCTACGCCTGTTCACGCGCGTCGTGGACTTGGGCTCGTTCAGTCGAGCAGCCACGGAGATGAGGATCGGCCAGCCAGCAGCGACCAAGCAGATTGCGCGCATGGAGAAGGAAGTAGGCGCGAGGCTGCTGCACCGGTCGACGCACGGTGTGACACCCACGGAGGTGGGCAATCTCTACTACGAGAAATGCAAGCTCATCGTGCACCATGACGAAGAGGCGCGTTCAGTCGCGACGCTGATGCAATCGCAGATTCAAGGTAGCTTGCGCATCAGTACATCCATCGCATTCGGCAGAAGAGTGCTGGCGCCGATGGTGCTGGACTTCATGCGGACTCATCCGCGATTGCTCATCGATCTCAGCTTCGACGACCGGTATGTGAACCTGGTGGAACAGGGGGTGGACGTGGCCATCCGCATGGGACGACTCGCGGACTCGACATTGGGTGCGACCTATCTCGGCTTCAGCCCCTGGGTTGCCGTGGCAGCTCCGGCCTACCTGCAAAGCCACGGGGTACCCGCGAAGCCGAACGATCTACTCGCCCACGATGCCTTGGTGTACAGCACGGCGCAGGGGGATGCAATCTGGCACTTCACGGGCGCGCATGAGGAGTCGTTGGCGATTGCAGTGAACGGGCGACTGCGATCGAACAACCTCTCGGCACTGCTCGGCGCAGCGCGCGACGGATTTGGAGTAGCCGTCTTGCCGCACTATGTCGCCAGCGATGGGTTGCGCTGCGGGGAGATCGTATCCATTCTGGACGACTGGAAGCTCCAAGGACAAGAGGTGCACGCAGTCTATCCATCGCCTCGGATGGTCCCGGCAAAGGTGCAGGAGTTGGTTGTATGGCTCCAAGCGCGGTTCACGGGCGACTGGTGGTGTTCCGACGTCCGCGACCTGCTCGGGCCACCAGAGGTAGCGGTGCTGCGCAACAGGAACTGTGACGCACGTAGTGCTTGA
PROTEIN sequence
Length: 325
MDRIQALRLFTRVVDLGSFSRAATEMRIGQPAATKQIARMEKEVGARLLHRSTHGVTPTEVGNLYYEKCKLIVHHDEEARSVATLMQSQIQGSLRISTSIAFGRRVLAPMVLDFMRTHPRLLIDLSFDDRYVNLVEQGVDVAIRMGRLADSTLGATYLGFSPWVAVAAPAYLQSHGVPAKPNDLLAHDALVYSTAQGDAIWHFTGAHEESLAIAVNGRLRSNNLSALLGAARDGFGVAVLPHYVASDGLRCGEIVSILDDWKLQGQEVHAVYPSPRMVPAKVQELVVWLQARFTGDWWCSDVRDLLGPPEVAVLRNRNCDARSA*