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SCNpilot_cont_300_bf_scaffold_415_curated_28

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 30749..31126

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TrbC n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BTS2_DELAS similarity UNIREF
DB: UNIREF100
  • Identity: 93.6
  • Coverage: 125.0
  • Bit_score: 226
  • Evalue 1.80e-56
conjugal transfer protein TrbC; K03197 type IV secretion system protein VirB2 similarity KEGG
DB: KEGG
  • Identity: 93.6
  • Coverage: 125.0
  • Bit_score: 226
  • Evalue 5.60e-57
Conjugal transfer protein TrbC {ECO:0000313|EMBL:ABM43051.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.6
  • Coverage: 125.0
  • Bit_score: 226
  • Evalue 2.50e-56

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Taxonomy

Acidovorax sp. JS42 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 378
ATGACGCACGTTGATGCTTTCCGTATTTCCGCAAATCCGCTTTCCCGGCCCGCGCGGCTGGAGCGCCTCGCTCGCCCGGCCCTGCAGGGCCTGCTGCTCGCGGCGTTGATGTTGCTGCTCGTCGGCACCGCGCAGGCCGCCGGCTCCTCGATGCCCTGGGAAGGGCCGCTGCAGTCCATCCTGGAGTCGATCCAGGGGCCTGTGGCCCGGATCATCGCGGTGATCATCATCATCGCCACGGGCCTGGCGCTGGCCTTCGGCGACACCTCGGGCGGGTTCCGCAAGCTGATCCAGATCGTTTTCGGCCTGTCGATCGCGTTCGCGGCTTCGAGCTTCTTCCTGTCGTTCTTCAGCTTCTCGGGCGGGGCCGTCGTATGA
PROTEIN sequence
Length: 126
MTHVDAFRISANPLSRPARLERLARPALQGLLLAALMLLLVGTAQAAGSSMPWEGPLQSILESIQGPVARIIAVIIIIATGLALAFGDTSGGFRKLIQIVFGLSIAFAASSFFLSFFSFSGGAVV*