ggKbase home page

SCNpilot_cont_300_bf_scaffold_415_curated_32

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 34662..35987

Top 3 Functional Annotations

Value Algorithm Source
Putative mating pair formation transmembrane protein n=1 Tax=Cupriavidus oxalaticus RepID=Q84EM8_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 86.4
  • Coverage: 449.0
  • Bit_score: 750
  • Evalue 7.30e-214
Putative mating pair formation transmembrane protein {ECO:0000313|EMBL:CAD61156.1}; TaxID=96344 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus oxalaticus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.4
  • Coverage: 449.0
  • Bit_score: 750
  • Evalue 1.00e-213
conjugal transfer protein TrbL; K07344 type IV secretion system protein TrbL similarity KEGG
DB: KEGG
  • Identity: 84.7
  • Coverage: 457.0
  • Bit_score: 745
  • Evalue 9.70e-213

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Cupriavidus oxalaticus → Cupriavidus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1326
ATGAACGACGTGACGGTCATCGACCGTTTCCTCGACACGTTCTCGCGCTACATCGACTCGGGCTTCGGGCTGCTGCAAGGCGAGGTGGCGTTCCTCACGGCCACGCTGATCGTCATCGATATGACGCTCGCCGGACTGTTCTGGGCCCTGGGCCATGCCAGCGGCGAGGGCGAGGATGTGATCGCCAAGCTGCTGCGCAAGGTGCTCTACGTCGGGGCCTTCGCCTACATCATCGGCAACTTCAATCAGCTGGCGGGGATCGTGTTCCGCTCCTTCGCCGGCCTGGGCCTCACGGCCAGCGGCTCGACGCTGAGCATGGGGAACTTCCTGCAGCCCGGGAGGCTGGCCAAGGCCGGCATCGAAGCGGGAGCGCCGATCCTGCAGCAGATCGGCGACATGGCAGGCTTTCCCGAGGTGTTCGTGAACATCGCGCCCATCGTGGTGCTGTTCCTGGCCTGGTTCATCGTCATCCTGTGCTTCTTCGTGCTGGCGGTGCAGCTCTTCGTGACGCTGATCGAGTTCAAGCTCACCACGCTCGCCGGATTCGTGCTGGTGCCGTTCGCCCTCTGGAACAAGACGGCGTTTCTGGCCGAGAAGGTGCTGGGCAACGTGGTGTCGTCGGGCATCAAGGTGCTGGTGCTGGCGGTCATCGTGGGCGTGGGCACGGGGTTGTTTGCCGAATTCAAGGTGCATCCCAGCGAGCCGTCCATCGACCATGCGCTGGTTGTGATGTTGGCCTCGCTCGCCTTGCTGGCGCTGGGGATTTTCGGGCCCGGGATTGCGACGGGGCTGGTTTCTGGTGGGCCGCAGCTCGGCGCGGGGGCGATGGCCGGCGCGACGTTGGGCACGGCAGGGGCTGCGATTGGCGTCGGCGCTGCAGCGGCCGGTGTTGGCGGCGCGGTGGCGGCCGGGGCGCGGATGGCGCCTGCCGCCGCGCGCTCAATGGCTTCGACCGCCAGCAGCGCCAAGTCGGCGTTCCAGGCCGGCTCGGCGAGTGCGGGCGGTGGCCTGAAGGGCGCTGCGGCGGGTTTGGGCAACGTCGCAAAGACCGGCGCGCAGGCGGCCGGGCAGAAGGTGGCCGATGGGGCGCGCTCGATCAGGGAGCGCGCCGCTGCTGCATTCAGTTCGGAGGCCCCTGCATCCGGCAGCGCTGCATCCAGCAGCGATGCACCTTCCGCCTCTGCGCAGGAGCAGCCTGCCTGGGCGAAGCGCCTGCACCGACGCCAGCAGCTCACCCACGCCGCGACCACCACCGCCCACGCGCTGCGCGGTGGCGACGGCGGCAGTTCCAGCAGCGGGCCGAGCCTGCGCGATTCCGATTCCTGA
PROTEIN sequence
Length: 442
MNDVTVIDRFLDTFSRYIDSGFGLLQGEVAFLTATLIVIDMTLAGLFWALGHASGEGEDVIAKLLRKVLYVGAFAYIIGNFNQLAGIVFRSFAGLGLTASGSTLSMGNFLQPGRLAKAGIEAGAPILQQIGDMAGFPEVFVNIAPIVVLFLAWFIVILCFFVLAVQLFVTLIEFKLTTLAGFVLVPFALWNKTAFLAEKVLGNVVSSGIKVLVLAVIVGVGTGLFAEFKVHPSEPSIDHALVVMLASLALLALGIFGPGIATGLVSGGPQLGAGAMAGATLGTAGAAIGVGAAAAGVGGAVAAGARMAPAAARSMASTASSAKSAFQAGSASAGGGLKGAAAGLGNVAKTGAQAAGQKVADGARSIRERAAAAFSSEAPASGSAASSSDAPSASAQEQPAWAKRLHRRQQLTHAATTTAHALRGGDGGSSSSGPSLRDSDS*