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SCNpilot_cont_300_bf_scaffold_417_curated_7

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 6703..8145

Top 3 Functional Annotations

Value Algorithm Source
Arabinose efflux permease family protein n=1 Tax=Variovorax sp. CF313 RepID=J2TKN4_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 93.1
  • Coverage: 480.0
  • Bit_score: 870
  • Evalue 9.00e-250
Arabinose efflux permease family protein {ECO:0000313|EMBL:EJL79107.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.1
  • Coverage: 480.0
  • Bit_score: 870
  • Evalue 1.30e-249
major facilitator superfamily protein similarity KEGG
DB: KEGG
  • Identity: 89.6
  • Coverage: 480.0
  • Bit_score: 845
  • Evalue 9.80e-243

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1443
ATGACGGTACTGCGCAGCGACATCCCCGCCCGCCTGGACCGCCTGCCGTGGTCGCGCTGGCACTGGCGCGTGGTGATCGCGCTGGGCGTGGCCTGGGTGCTCGACGGCCTGGAGGTCACGCTGGTGGGCTCCATCGGCGCGGTGCTCGAACGGTCCGACACGCTGGGCCTCACGGCCGGCGAGATCGGGCTGTCGGGCTCGGTGTACGTGGCGGGCGCGGTGATCGGCGCCCTGCTCTTCGGCCGGCTCACCGACCGGCTCGGGCGCAAGAAGCTCTTTCTCGTCACGCTGGTGGTCTACACGGTGGGCACGCTGGCCACGGCGTTTTCCCCTGACTTCGCGTTCTTCGCGCTGTGCCGCTTCGTCACCGGGCTGGGCATCGGCGGCGAGTACGCGGCCATCAACTCGGCCATCGACGAGCTGATTCCGGCGCGCGTGCGCGGGCGCGTCAACCTCGCGATCAACGGCAGCTTTTGGATCGGCGCCGGCCTCGGCGCGGGGCTGAGCCTGGTGCTGCTGGACCCGCATGTGATCGGCCCGGTGTGGGGCTGGCGCGCGGGCTTCGCGCTGGGCGCTGTGCTGGCGGTGGCCATCCTGCTGGTGCGGCGCGACGTGCCCGAGAGCCCGCGCTGGCTCATTGCACACGGTCGCGCGGACGAAGCCAGGCGCATCGTCGAGCAGATCGAGGCGGAGGTCTCCGCGCAGCACGGCCCGCTGCCCGCGCCGCAGGGCCATGTCGTGAACTACACCGACGCGCGCCAGACCAGCCCGTCGATGCGCGAAGTGGCGCGCGTGCTGTTCAAGCGCTACCGGCAGCGCAGCGTGGTGGCGCTTGCGCTGATGGTGTCGCAGGCCTTCTTCTACAACGCGATCTTCTTCACCTACGCGCTGGTTCTCACGCGCTTCTATGGCGTGCCTGAAGCCAGCGTGGCGCTCTACATCTTTCCGTTCGCGCTCGGCAACGTGCTGGGGCCTCTGCTGCTGGGCCCGCTGTTCGACAGCCTGGGCCGACGCAAGATGATCGCGCTGACCTATGTGCTCGCGGGCGTGGGCCTGGCGCTCACCGGCTGGGCCTTCATGATGGGCTGGCTCGACGCGCGCAGCCAGGCGCTGTGCTGGTCGGCGGTGTTCTTTTTGGCTTCGGCAGCGGCAAGCTCTGCCTATCTCACGGTGAGCGAAGTGTTCCCGCTGGAGATGCGCGCGATGGCCATCGCGATCTTCTATGCCGTCGGCATGGGCGCGGGCGGCTTCGCCGCGCCGCTGCTGTTCGGCCTGCTGATCGAGACCGGCAGCCGGGGCGCGGTGATGGTGGGCTACGGCATCGGCGCGGTGCTGGTCATCGTGGCGGGTCTGCTGGCCCTGCGCTATGCGGCCGACGCGGAACGAAAGCCGCTGGAAGAAGTGGCGCCGCCGCTGGCGGCCGAGGGCGACGGCGAACGCTGA
PROTEIN sequence
Length: 481
MTVLRSDIPARLDRLPWSRWHWRVVIALGVAWVLDGLEVTLVGSIGAVLERSDTLGLTAGEIGLSGSVYVAGAVIGALLFGRLTDRLGRKKLFLVTLVVYTVGTLATAFSPDFAFFALCRFVTGLGIGGEYAAINSAIDELIPARVRGRVNLAINGSFWIGAGLGAGLSLVLLDPHVIGPVWGWRAGFALGAVLAVAILLVRRDVPESPRWLIAHGRADEARRIVEQIEAEVSAQHGPLPAPQGHVVNYTDARQTSPSMREVARVLFKRYRQRSVVALALMVSQAFFYNAIFFTYALVLTRFYGVPEASVALYIFPFALGNVLGPLLLGPLFDSLGRRKMIALTYVLAGVGLALTGWAFMMGWLDARSQALCWSAVFFLASAAASSAYLTVSEVFPLEMRAMAIAIFYAVGMGAGGFAAPLLFGLLIETGSRGAVMVGYGIGAVLVIVAGLLALRYAADAERKPLEEVAPPLAAEGDGER*