name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_300_bf_scaffold_417_curated_1
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1..480)
|
Phosphonoacetate hydrolase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V5Q0_VARPE
Variovorax paradoxus strain MEDvA23 contig_119, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ17731.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
phosphonoacetate hydrolase
|
|
SCNpilot_cont_300_bf_scaffold_417_curated_2
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(482..1210)
|
Transcriptional regulator, GntR family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V5P9_VARPE
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ADU35946.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_300_bf_scaffold_417_curated_3
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1366..2406
|
2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V5P8_VARPE
Variovorax paradoxus strain MEDvA23 contig_119, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ17733.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
2-aminoethylphosphonate ABC transporter 1-aminoethylphosphonate-binding protein component; K02012 iron(III) transport system substrate-binding protein
|
|
SCNpilot_cont_300_bf_scaffold_417_curated_4
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2585..3721
|
2-aminoethylphosphonate ABC transporter ATP-binding protein component; K02010 iron(III) transport system ATP-binding protein [EC:3.6.3.30]
2-aminoethylphosphonate ABC transport system, ATP-binding protein component n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V5P7_VARPE
Variovorax paradoxus strain MEDvA23 contig_119, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ17734.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
|
|
SCNpilot_cont_300_bf_scaffold_417_curated_5
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3718..5451
|
2-aminoethylphosphonate ABC transport system, permease protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V5P6_VARPE
Variovorax paradoxus strain MEDvA23 contig_119, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ17735.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
2-aminoethylphosphonate ABC transporter permease; K02011 iron(III) transport system permease protein
|
|
SCNpilot_cont_300_bf_scaffold_417_curated_6
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5493..6623
|
2-aminoethylphosphonate/pyruvate transaminase; K03430 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
2-aminoethylphosphonate--pyruvate transaminase {ECO:0000256|HAMAP-Rule:MF_01376, ECO:0000256|SAAS:SAAS00009569}; EC=2.6.1.37 {ECO:0000256|HAMAP-Rule:MF_01376, ECO:0000256|SAAS:SAAS00009569};; 2-aminoethylphosphonate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01376}; AEP transaminase {ECO:0000256|HAMAP-Rule:MF_01376}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
2-aminoethylphosphonate--pyruvate transaminase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V5P5_VARPE
|
|
SCNpilot_cont_300_bf_scaffold_417_curated_7
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6703..8145
|
Arabinose efflux permease family protein n=1 Tax=Variovorax sp. CF313 RepID=J2TKN4_9BURK
Arabinose efflux permease family protein {ECO:0000313|EMBL:EJL79107.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
major facilitator superfamily protein
|
|
SCNpilot_cont_300_bf_scaffold_417_curated_8
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8153..9439)
|
Uncharacterized protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V5P3_VARPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU35940.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_300_bf_scaffold_417_curated_9
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9601..10227
|
Tripartite ATP-independent periplasmic transporter DctQ component n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V5P2_VARPE
tripartite ATP-independent periplasmic transporter dctq component
Tripartite ATP-independent periplasmic transporter DctQ component {ECO:0000313|EMBL:ADU35939.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_300_bf_scaffold_417_curated_10
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10248..12086
|
TRAP dicarboxylate transporter, DctM subunit n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V5P1_VARPE
TRAP dicarboxylate transporter subunit DctM
TRAP dicarboxylate transporter, DctM subunit {ECO:0000313|EMBL:ADU35938.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_300_bf_scaffold_417_curated_11
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12157..13239)
|
Extracellular solute-binding protein, family 7 n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V5P0_VARPE
family 7 extracellular solute-binding protein
Extracellular solute-binding protein, family 7 {ECO:0000313|EMBL:ADU35937.1}; Flags: Precursor;; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_300_bf_scaffold_417_curated_12
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13460..14614
|
amino acid ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI00036F9FCD
Leu/Ile/Val-binding periplasmic (Pbp) abc transporter protein; K01999 branched-chain amino acid transport system substrate-binding protein
Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
|
|
SCNpilot_cont_300_bf_scaffold_417_curated_13
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14753..15634
|
ABC transporter permease n=1 Tax=Variovorax paradoxus RepID=UPI000372BDF6
High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1
Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
|
|
SCNpilot_cont_300_bf_scaffold_417_curated_14
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15636..16499
|
amino acid ABC transporter n=1 Tax=Variovorax paradoxus RepID=UPI0003721C63
livM; Branched-chain amino acid transport system permease protein LivM
Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
|
|
SCNpilot_cont_300_bf_scaffold_417_curated_15
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16496..17299
|
ABC transporter n=1 Tax=Variovorax paradoxus RepID=UPI0003724DC2
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family {ECO:0000313|EMBL:ENZ76605.1}; TaxID=1264675 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii OR214.;"
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein
|
|
SCNpilot_cont_300_bf_scaffold_417_curated_16
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17296..18027
|
amino acid ABC transporter ATPase n=1 Tax=Variovorax paradoxus RepID=UPI00036003B0
amino acid ABC transporter ATPase; K01996 branched-chain amino acid transport system ATP-binding protein
Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
|
|
SCNpilot_cont_300_bf_scaffold_417_curated_17
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18169..20022)
|
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
deoxyxylulose-5-phosphate synthase; K01662 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Variovorax paradoxus RepID=UPI00037E2D1D
|
|
SCNpilot_cont_300_bf_scaffold_417_curated_18
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20045..20968)
|
polyprenyl synthetase n=1 Tax=Variovorax paradoxus RepID=UPI00037B6034
Geranylgeranyl pyrophosphate synthase {ECO:0000313|EMBL:EJL79100.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
|
|
SCNpilot_cont_300_bf_scaffold_417_curated_19
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20965..21231)
|
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
exodeoxyribonuclease vii, small subunit; K03602 exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
Exodeoxyribonuclease 7 small subunit n=1 Tax=Variovorax sp. CF313 RepID=J3CV36_9BURK
|
|
SCNpilot_cont_300_bf_scaffold_417_curated_20
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21460..22602
|
Ring-hydroxylating dioxygenase, large terminal subunit n=1 Tax=Variovorax sp. CF313 RepID=J2L1I4_9BURK
Ring-hydroxylating dioxygenase, large terminal subunit {ECO:0000313|EMBL:EJL79098.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
rieske (2fe-2S) iron-sulfur domain
|
|
SCNpilot_cont_300_bf_scaffold_417_curated_21
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22662..23594
|
Putative transmembrane protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CT93_VARPS
Variovorax paradoxus strain MEDvA23 contig_119, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ17746.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
transmembrane protein
|
|
SCNpilot_cont_300_bf_scaffold_417_curated_22
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23650..24558
|
rhodanese domain-containing protein; K01011 thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
Rhodanese-related sulfurtransferase n=1 Tax=Variovorax sp. CF313 RepID=J2KVT2_9BURK
Rhodanese-related sulfurtransferase {ECO:0000313|EMBL:EJL77098.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
|
|
SCNpilot_cont_300_bf_scaffold_417_curated_23
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24555..25133
|
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J3CRL8_9BURK
Variovorax paradoxus strain MEDvA23 contig_119, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ17748.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
ABC-type metal ion transport system, periplasmic component/surface adhesin
|
|
SCNpilot_cont_300_bf_scaffold_417_curated_24
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25138..25884
|
methionine ABC transporter ATP-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI000376F276
Variovorax paradoxus strain MEDvA23 contig_119, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ17749.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
ABC transporter; K02003 putative ABC transport system ATP-binding protein
|
|
SCNpilot_cont_300_bf_scaffold_417_curated_25
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25881..27143
|
Uncharacterized protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V5N1_VARPE
hypothetical protein; K02004 putative ABC transport system permease protein
Uncharacterized protein {ECO:0000313|EMBL:ADU35928.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_300_bf_scaffold_417_curated_26
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27146..27787
|
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036FFB97
hypothetical protein; K09950 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS18213.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
|
|
SCNpilot_cont_300_bf_scaffold_417_curated_27
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27955..30003
|
Small-conductance mechanosensitive channel n=1 Tax=Variovorax sp. CF313 RepID=J2KVT7_9BURK
Small-conductance mechanosensitive channel {ECO:0000313|EMBL:EJL77103.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_417_curated_28
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(30059..31327)
|
glutamate carboxypeptidase; K01295 glutamate carboxypeptidase [EC:3.4.17.11]
peptidase M20 n=1 Tax=Variovorax paradoxus RepID=UPI00035CCAC9
Peptidase M20 {ECO:0000313|EMBL:ACS18211.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
|
|
SCNpilot_cont_300_bf_scaffold_417_curated_29
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(31425..32153)
|
Transcriptional regulator, XRE family n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CT85_VARPS
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ACS18210.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
|
|
SCNpilot_cont_300_bf_scaffold_417_curated_30
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
32357..33511
|
FAD-dependent oxidoreductase n=1 Tax=Variovorax paradoxus RepID=UPI00036A0C2C
Glycine/D-amino acid oxidase, deaminating {ECO:0000313|EMBL:EJL77106.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
FAD-dependent oxidoreductase
|