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SCNpilot_cont_300_bf_scaffold_417_curated_10

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 10248..12086

Top 3 Functional Annotations

Value Algorithm Source
TRAP dicarboxylate transporter, DctM subunit n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V5P1_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 92.5
  • Coverage: 613.0
  • Bit_score: 1089
  • Evalue 0.0
TRAP dicarboxylate transporter subunit DctM similarity KEGG
DB: KEGG
  • Identity: 92.5
  • Coverage: 613.0
  • Bit_score: 1089
  • Evalue 0.0
TRAP dicarboxylate transporter, DctM subunit {ECO:0000313|EMBL:ADU35938.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.5
  • Coverage: 613.0
  • Bit_score: 1089
  • Evalue 0.0

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1839
ATGGAATTCATTGTTGCCAACTTCGCCCCGATCATGTTCGCGGGACTGATCTGCTTCCTCCTGCTGGGCTACCCGGTCGCCTTCAGCCTCGGGGCCTGCGGCCTGTTCTTCGGTCTCGTCGGCATCGAGCTCGGCGTGTTCCAGTCGTCGGTGATGGCGTGGCTGCCCCAGCGGCTGATCGGCATCATGGCCAACGACACACTGCTGGCGGTGCCCTTCTTCACGCTCATGGGGCTCATATTGGAGCGCAGCGGCATGGCCGAGGACCTGCTCGACACGGTCGGCCAGGTCTTCGGTCCGATGCGCGGCGGCCTGGCGCTGGCGGTGATCTTCGTCGGCGCGCTGCTGGCGGCCACCACCGGGGTGGTGGCGGCCTCGGTCATCTCGATGGGCCTGATCTCGCTGCCGATCATGCTGCGCTACGGCTACGACCGGCGGCTTTCCAGCGGCGTCATTGCCGCCTCGGGCACGCTGGCGCAGATCATCCCGCCCTCGCTGGTGCTGATCATCATGGCCGACCAGCTCGGCAAGAGCGTCGGCGACATGTACAAGGGCGCCTTCCTGCCCGGCTTCATGCTGATGGGCCTGTACGTGGTCTATGTCGTGTTCCTCGCGATCTTCAGGCCCGCGCAGGTGCCCGCGCTGCCGCCCGAGGCGCGCACCTTCCGCGAACCCAACGGCAGCGGCGGCTATACGTCGCTGGTGGCGCTTGCAGCGCTGTCGGCCGTGGTGGCGGTCTGGCTGGCTCGCAACATGGCCGCCGTCCACACCTGGTTCCAGGGCCAGGAGGTGACCTCGGTGGCCACCGACGAGAAAGTCGTCGTCGCCATGTGCGGCGGCGTGTTCGTCGCGCTGGTCATCGCGCTGATCAACAAGGGCCTGAAGCTCAACCTGCTGTCGCGGCTGGCCGAGCGCGTGACCTTCGTGCTCATTCCGCCGCTGCTGCTGATCTTCCTCGTGCTGGGCACCATCTTCCTGGGCGTGGCCACGCCCACCGAAGGCGGCGCGATGGGTGCCTTGGGCGCCCTGATCATGGCCTGGGTGCGCCGGCGCATGAGCCTCGCCCTGCTGAAGCAGGCGCTGGCCTCCACCACCAAGCTGTCCAGCTTCGTGATGTTCATCCTGATCGGCGCGACGGTGTTCAGCCTGGTGTTCCAGGCCGCCGACGGCCCGATCTGGGTCGAGCACCTGCTGTCGTCCCTGCCCGGCGGCCCGGTGGGCTTCCTGATCGCGGTGAACGTGCTGGTGTTCTTCCTCGCGTTCTTCCTGGACTACTTCGAGCTGTCGTTCATCGTGGTGCCGTTGCTGGCGCCGGTGGCCCACAAGCTGGGCATCGACCTGATCTGGTTCGGCGTGCTGCTGGCAGTGAACATGCAGACCTCGTTCATGCATCCGCCCTTCGGCTTCGCGCTGTTCTTCCTGCGCTCCGTCGCACCGGACAAGCAGTACGTGGACCGCGTGACCCAGAAGGTCATGGAGCCGGTCACGACGATGCAGATCTACAGGGGCGCGGTCCCGTTCGTGCTGATCCAGCTCACCATGGTGGGCGTGCTGATCGCGTTCCCTCAGATCGTGACGGGCGCCCTCGACAAGGAGGTCAAGGTCAACCTCGACGACATCGGGGCGCAGATGCGCGACAGCCTGAAGCAGGAAGATGGCGCGCCGGGGGCCGACCCCTACGGCGGCCCCGAGGACGCCGCGCCGCCTGGCGCCGAGCCGCAGCCGGGCGCCGAAGGCGCCGCGCCGACACCGGCGCCCGAGCCAGCGCCGGCCGAAAGCGGCGAGAGCGACCCCATGAAGGCCATGCAGGACGCGCTCAAGCAGCAAAACAAGCCCTGA
PROTEIN sequence
Length: 613
MEFIVANFAPIMFAGLICFLLLGYPVAFSLGACGLFFGLVGIELGVFQSSVMAWLPQRLIGIMANDTLLAVPFFTLMGLILERSGMAEDLLDTVGQVFGPMRGGLALAVIFVGALLAATTGVVAASVISMGLISLPIMLRYGYDRRLSSGVIAASGTLAQIIPPSLVLIIMADQLGKSVGDMYKGAFLPGFMLMGLYVVYVVFLAIFRPAQVPALPPEARTFREPNGSGGYTSLVALAALSAVVAVWLARNMAAVHTWFQGQEVTSVATDEKVVVAMCGGVFVALVIALINKGLKLNLLSRLAERVTFVLIPPLLLIFLVLGTIFLGVATPTEGGAMGALGALIMAWVRRRMSLALLKQALASTTKLSSFVMFILIGATVFSLVFQAADGPIWVEHLLSSLPGGPVGFLIAVNVLVFFLAFFLDYFELSFIVVPLLAPVAHKLGIDLIWFGVLLAVNMQTSFMHPPFGFALFFLRSVAPDKQYVDRVTQKVMEPVTTMQIYRGAVPFVLIQLTMVGVLIAFPQIVTGALDKEVKVNLDDIGAQMRDSLKQEDGAPGADPYGGPEDAAPPGAEPQPGAEGAAPTPAPEPAPAESGESDPMKAMQDALKQQNKP*