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SCNpilot_cont_300_bf_scaffold_417_curated_13

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 14753..15634

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Variovorax paradoxus RepID=UPI000372BDF6 similarity UNIREF
DB: UNIREF100
  • Identity: 96.5
  • Coverage: 284.0
  • Bit_score: 533
  • Evalue 1.20e-148
High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1 similarity KEGG
DB: KEGG
  • Identity: 76.5
  • Coverage: 293.0
  • Bit_score: 447
  • Evalue 3.60e-123
Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 79.6
  • Coverage: 294.0
  • Bit_score: 466
  • Evalue 2.60e-128

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Taxonomy

RIFOXYC12_FULL_Burkholderiales_65_23_curated → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 882
GTGCTCGATCAGCAGCTTGTCAACGCCTTGTCGCTCGGGTGCGTCTACGCACTCTTCGCGCTCGGCTTCACACTCATATTCGGCGTGCTCGGCGTCATCAACCTCTCGCACGGCGCGGTGTTCATGGTCGGCGCGTATGCCGCGGCCGAATTCATGCGCGTCTCGGGCATGCCGCTGTGGGTCGGCCTGCCTTTCGCCTTCGCCTTCTGCGGCGTGCTGGGGTTCCTTGTCGACGTGCTGGTGCTCAAACCGCTGCGCAAGCGCAACGCACCCCACCTGATTCCGATGATCGCCACCATCGGCGTGGCCATCATCCTGAACAACGGCATCCAGGGCATCTTCGGCGCGGAGAACCTGCGCTTTCCGCCCGGCACCATTCCCGACGACGCGCTGGTGTTCGCCGGCATCCACGTCACCGTGCTCGAACTGGGCATCGTGCTCGCATCGTTCGTGCTGATGGGCGTGCTGATGCTGTCGCTGCAGCGCACCCAACTGGGCCGCGCGCTGCGCGCCATTGCCGAGTCGCCCAAGGCGGCGTACCTGGTGGGCGTGAACGTCGAGGGCCTGTTCTACCTGACCTCGTTCGTGGCCGCCGGCCTGGGCGGCGTGGCGGGCGTGCTGATCGGCCTGTATTCGAATGCGCTCTTCCCGCTGATGGGCCAGCCGATGCTCGAAAAGGGCATCGCGGTGATCATCCTGGGCGGCATGGGCGACATCCGCGGCGCGCTGCTCGGCGGCCTGTTCCTCGGTTTTGCCGAAGTGCTGTCGGTGGCCTACGTGGGTTCCAACATGCGCGACGCGGTGGCCTTCGGCCTGCTGTTCCTCGTGCTGCTGGTGCGTCCCAAGGGCCTGTTCGGCTCGCTCAAGGAGCGCAAGGTCTAG
PROTEIN sequence
Length: 294
VLDQQLVNALSLGCVYALFALGFTLIFGVLGVINLSHGAVFMVGAYAAAEFMRVSGMPLWVGLPFAFAFCGVLGFLVDVLVLKPLRKRNAPHLIPMIATIGVAIILNNGIQGIFGAENLRFPPGTIPDDALVFAGIHVTVLELGIVLASFVLMGVLMLSLQRTQLGRALRAIAESPKAAYLVGVNVEGLFYLTSFVAAGLGGVAGVLIGLYSNALFPLMGQPMLEKGIAVIILGGMGDIRGALLGGLFLGFAEVLSVAYVGSNMRDAVAFGLLFLVLLVRPKGLFGSLKERKV*