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SCNpilot_cont_300_bf_scaffold_417_curated_12

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 13460..14614

Top 3 Functional Annotations

Value Algorithm Source
amino acid ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI00036F9FCD similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 384.0
  • Bit_score: 739
  • Evalue 1.90e-210
Leu/Ile/Val-binding periplasmic (Pbp) abc transporter protein; K01999 branched-chain amino acid transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 80.5
  • Coverage: 374.0
  • Bit_score: 580
  • Evalue 4.70e-163
Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 82.6
  • Coverage: 379.0
  • Bit_score: 612
  • Evalue 3.80e-172

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Taxonomy

RIFOXYC12_FULL_Burkholderiales_65_23_curated → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1155
ATGAGACTCCCTAACTCCTTCAAACCCGCATTGCTCGCGTTCGCCGCGGCCACCGCTTTCGGCGCGCAAGCCGCCGACATCAAGATCGGCGTTGCAGCCGCCCTGTCCGGCGGTGCCGCGCAGTACGGCAGCGCCATCCGCAACGGCTTCCAGCTGGCCGCGGACGAAATCAACGCCGCCGGCGGCATCAACGGCGACAAGATCGTGCTGGCCGTCGAAGACGAGCAGGGCAAGAAGGAAGACGCGATCAACGTCTTCAAGAAGCTGATCTTCCAGGACAAGGTCCTGATGACCTTCGGCCCCACGCTGTCGAACTCGGCCCAGGCGGCCGACCCGATCGCCCAGGCCGCCAAGACGGTGGCCTTCGGCACCTCGAACACGGCCGACGGCATCACCTCGATCGGCGACTACGTGTTCCGCAACTCGGTGACCGAAGCCGACGTGCTGCCCGAGACCCTGCGCGTGGCCATCAAGCACGCCAACGTGAAGAAGGTCGCGGTGCTGTACGGCAACGACGACGTGTTCACCAAGAGCGGCTACGACAACTTCAAGAAGGCCCTGGAAGACCTGAAGCTGCCCGTGACCACGACCGAGACCTTCGCCAAGGGCGACGTCGACTTCAAGGCCCAGCTCACCAAGATCAAGGCCACCAACCCCGACGCCATCGTGCTGTCGGCCCTGCTGGCCGAAGGCGCGCCGATCATGGTGCAGGCCCGCCAGCTCGGCCTGAACGTGCCGGTCATCGGCGGCAACGGCATGAACTCGACCAAGATCTTCGACCTGGCCAAGGGCAGCTCGGACAACCTGTACGTCGGCAGCCCCTGGTCGGCCAGCAACGCCACGCCGGAGAACACCAAGTTCCAGAAGGCCTACAACGACAAGTTCAAGATGGCGCCCGACCAGTTCGCCGCGCAGGCCTACGACGGCCTGTACGTGGTGGCCCAGGCGCTCAAGGGCGTGAAGCTGTCGGGCAACCTGGCGGCCGACCGCACCGCCCTGCGCGACGCGCTGCCGAACGTGAAGTGGACCGGTGCCACCGGCGCCTTCGCCTTCGCGCGCGCCAAGGACAAGGCCGGCAAGCCCGCCGGCTACGACGCGCAGCAGACGGCCATCGTGAGTGTCACGAAGGGCACCGCCTTCGTGATCGAGAAGTAA
PROTEIN sequence
Length: 385
MRLPNSFKPALLAFAAATAFGAQAADIKIGVAAALSGGAAQYGSAIRNGFQLAADEINAAGGINGDKIVLAVEDEQGKKEDAINVFKKLIFQDKVLMTFGPTLSNSAQAADPIAQAAKTVAFGTSNTADGITSIGDYVFRNSVTEADVLPETLRVAIKHANVKKVAVLYGNDDVFTKSGYDNFKKALEDLKLPVTTTETFAKGDVDFKAQLTKIKATNPDAIVLSALLAEGAPIMVQARQLGLNVPVIGGNGMNSTKIFDLAKGSSDNLYVGSPWSASNATPENTKFQKAYNDKFKMAPDQFAAQAYDGLYVVAQALKGVKLSGNLAADRTALRDALPNVKWTGATGAFAFARAKDKAGKPAGYDAQQTAIVSVTKGTAFVIEK*