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SCNpilot_cont_300_bf_scaffold_417_curated_17

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(18169..20022)

Top 3 Functional Annotations

Value Algorithm Source
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.9
  • Coverage: 612.0
  • Bit_score: 1170
  • Evalue 0.0
deoxyxylulose-5-phosphate synthase; K01662 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] similarity KEGG
DB: KEGG
  • Identity: 95.3
  • Coverage: 613.0
  • Bit_score: 1168
  • Evalue 0.0
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Variovorax paradoxus RepID=UPI00037E2D1D similarity UNIREF
DB: UNIREF100
  • Identity: 95.5
  • Coverage: 617.0
  • Bit_score: 1185
  • Evalue 0.0

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1854
ATGGCTGCTCCGCTGCTTCCCACACTCCATGACCCCGCGCCGATCCGCAAATACGACCGGACCCAGCTGCGCCAGCTGTCCGACGAGGTGCGCGCCTGCGTGCTCGACAACGTGTCGCGCACCGGCGGCCACCTGAGTTCGAACCTCGGCACGGTCGAGCTGACGGTCGCGCTGCATCACGTGTTCAACACGCCGCACGACCGGCTGGTGTGGGACGTGGGCCACCAGACCTATCCGCACAAGATCCTCACCGGCCGGCGCGAGCGCATGCCCACGCTTCGGCAGATCGGCGGCATCTCGGGCTTTCCGCAGCGCAGCGAGAGCGAGTACGACACCTTCGGCACCGCCCATTCGTCGACCAGCATCTCGGCGGCGCTGGGCATGGCCATGGCCGCCAAGCAGAAGGGCGAGGACCGCCACACGGTGGCCATCATCGGCGACGGCGCGCTCACGGCCGGCATGGCCTTCGAGGCGCTGAACAACGCGGGCGTGTGCGACTGCAAGCTGCTCGTGATCCTGAACGACAACGACATGTCGATCAGCCCGCCGGTGGGCGCGCTCAACCGCTACCTCGCGCAGTTGATGAGCGGCAACTTCTACGCCGCCGCCAAGAGCGTGGGCAAGAGCGTGCTGCGCAATGCACCGCCGCTGTTCGAGCTGGCCAAGCGGCTGGAGCAGCATGCCAAGGGCATGGTCGTGCCGGCCACGCTGTTCGAGCAGTTCGGCTTCAACTACGTGGGCCCGATCGACGGCCACGACCTCGATTCGCTGGTGCCCACGCTGGAGAACCTCAAGCACCTGGAAGGCCCGCAGTTCCTGCACGTGGTCACCAGGAAGGGGCAGGGCTACAAGCTGGCCGAGGCCGACCCCGTGGCCTACCACGGCCCCGGCAAGTTCGACCCGCAGGTGGGGCTGGTCAAGTCCACCGCCCCCGCCAAGCAGACCTTCACGCAGGTGTTCGGCCAGTGGCTGTGCGACACGGCGGCCGCCGACGGCCGGCTGGTGGGCATCACGCCAGCGATGCGCGAAGGCTCGGGGCTCGTGGAGTTCGAAAAGCGCTTCCCCGCCCGTTACTACGACGTCGGCATCGCCGAGCAGCACGCCGTGACCTTCGCCGCCGGCCTGGCCTGCGAAGGCCTGAAGCCGGTGGTCGCGATCTACTCGACCTTCCTGCAGCGCGCCTACGACCAACTGATCCACGACGTGGCGATCCAGAACCTGCCGGTGGTGTTCGCGCTCGACCGCGCGGGCCTGGTCGGTGCCGACGGCGCGACGCACGCGGGTGCCTACGACATCCCGTTCCTGCGCTGTATTCCGAACATGAGCATCGCGTGCCCGGCCGACGAGCGCGAGTGCCGCCAACTGCTGACCAGCGCCTACGAGCAGAGCCACCCGGTGGCGGTGCGCTATCCGCGTGGCGCGGGTGCCGGCGTCGCGCCGCATCTCACGCTGGACGCGCTGCCCCTGGGCAAGGGCGAGATCCGCCGCGAAGGCAAGCGCATCGCGATCCTCGCCTTCGGCACGCTGCTGTATCCGGCGCTCGCGGCCGCCGAGTCGCTCGACGCGACGGTGGTCAACATGCGCTGGGCCAAGCCGCTGGACGTCGAACTGCTGCTGCAGGTCGCGCGCTCGCACGATGCCATCGTGACGCTGGAAGAGGGTGCCATCATGGGCGGCGCCGGCAGCGCGGTGCTCGAGGCGCTGCAGGCTGCGAACGTGCTGAAGCCGGTGCTGCAGCTGGGCCTGCCCGACCAGTTCATCGAGCATGGCGATCCGGCGAAGCTGCTGGCCGGCATCGGGCTCGATGCGGCGGGTATCGAGGCCTCGATCGTCGAGCGCTTCGGCAAGGCCTGA
PROTEIN sequence
Length: 618
MAAPLLPTLHDPAPIRKYDRTQLRQLSDEVRACVLDNVSRTGGHLSSNLGTVELTVALHHVFNTPHDRLVWDVGHQTYPHKILTGRRERMPTLRQIGGISGFPQRSESEYDTFGTAHSSTSISAALGMAMAAKQKGEDRHTVAIIGDGALTAGMAFEALNNAGVCDCKLLVILNDNDMSISPPVGALNRYLAQLMSGNFYAAAKSVGKSVLRNAPPLFELAKRLEQHAKGMVVPATLFEQFGFNYVGPIDGHDLDSLVPTLENLKHLEGPQFLHVVTRKGQGYKLAEADPVAYHGPGKFDPQVGLVKSTAPAKQTFTQVFGQWLCDTAAADGRLVGITPAMREGSGLVEFEKRFPARYYDVGIAEQHAVTFAAGLACEGLKPVVAIYSTFLQRAYDQLIHDVAIQNLPVVFALDRAGLVGADGATHAGAYDIPFLRCIPNMSIACPADERECRQLLTSAYEQSHPVAVRYPRGAGAGVAPHLTLDALPLGKGEIRREGKRIAILAFGTLLYPALAAAESLDATVVNMRWAKPLDVELLLQVARSHDAIVTLEEGAIMGGAGSAVLEALQAANVLKPVLQLGLPDQFIEHGDPAKLLAGIGLDAAGIEASIVERFGKA*