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SCNpilot_cont_300_bf_scaffold_417_curated_24

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 25138..25884

Top 3 Functional Annotations

Value Algorithm Source
methionine ABC transporter ATP-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI000376F276 similarity UNIREF
DB: UNIREF100
  • Identity: 90.4
  • Coverage: 249.0
  • Bit_score: 441
  • Evalue 7.00e-121
Variovorax paradoxus strain MEDvA23 contig_119, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ17749.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.9
  • Coverage: 248.0
  • Bit_score: 438
  • Evalue 4.90e-120
ABC transporter; K02003 putative ABC transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 88.0
  • Coverage: 251.0
  • Bit_score: 436
  • Evalue 7.10e-120

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 747
GTGAGCAATTCCCCGCAGGGCGAGACGTCGGCGCTGCGCGTCGTCCTCGCCGCAGAAGCGCTGCGCTTCTCATGGCCCGGCGTGAAGACGCCTTGCATCGACATCGAGGCCTTTCGCATCACCGCCGGCGAATCGGTGTTCCTGCACGGCCCCAGCGGCTGCGGCAAGAGCACGCTGCTGTCGCTGCTGGCCGGCGTGCTGGTGGCCGACGAAGGCCGCGTCACGCTGCTGGGCCACGACTGGTCGAAGCTCTCGGGCGCCCAGCGCGATCGCAGCCGCGTGGCGCACGTGGGCTACATCTTCCAGCAGTTCAACCTGCTGCCCTACCTGAGCGTGATCGACAACGTGCTGCTGCCGTGCCGCTTCTCGGCGCGGCGCGAGTCGCAGGCCGCGCGCAACGGCAGCGCCCGCCAGGAAGCCGAGCACCTGCTCGCGCAGATGGGCCTGGACCGCAACCTGTGGAAGCGCCAGGCGCTGCAGCTGTCCGTGGGCCAGCAGCAGCGGGTGGCCGCGGCGCGCGCGCTCATCGGCCAGCCAGAGGTGGTGATCGCCGACGAGCCCACTTCGGCGCTCGACGAAGACCGGCGCGAAGCCTTCCTCGACGTGCTGCTGACAGCCTGCGCGCAGAACCACAGCGCGCTGGTGTTCGTGAGCCACGACCAGCGCATCGCGCAGCGTTTCGTGCGGCATGTGCTGCTGCCCGAGATCAACCGCGCGGCCACGAGCGCGATGGCGGTGGATGCATGA
PROTEIN sequence
Length: 249
VSNSPQGETSALRVVLAAEALRFSWPGVKTPCIDIEAFRITAGESVFLHGPSGCGKSTLLSLLAGVLVADEGRVTLLGHDWSKLSGAQRDRSRVAHVGYIFQQFNLLPYLSVIDNVLLPCRFSARRESQAARNGSARQEAEHLLAQMGLDRNLWKRQALQLSVGQQQRVAAARALIGQPEVVIADEPTSALDEDRREAFLDVLLTACAQNHSALVFVSHDQRIAQRFVRHVLLPEINRAATSAMAVDA*