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SCNpilot_cont_300_bf_scaffold_417_curated_15

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 16496..17299

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter n=1 Tax=Variovorax paradoxus RepID=UPI0003724DC2 similarity UNIREF
DB: UNIREF100
  • Identity: 97.0
  • Coverage: 267.0
  • Bit_score: 514
  • Evalue 9.10e-143
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family {ECO:0000313|EMBL:ENZ76605.1}; TaxID=1264675 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii OR214.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.5
  • Coverage: 265.0
  • Bit_score: 393
  • Evalue 3.30e-106
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 73.6
  • Coverage: 265.0
  • Bit_score: 386
  • Evalue 6.90e-105

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Taxonomy

Ralstonia pickettii → Ralstonia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 804
ATGAGCGACAACACCCTTCTCACGTTGAAGAACGTGTCGCGCCATTTCGGCGGACTCAAGGTCCTGCAGGACGTGAACCTGGACATTCCGAAGGGCGGCATCTTCGGGCTCATCGGCCCGAACGGCGCGGGCAAGACGACGGTGTTCAACCTGATCACCGGCCTGCTGCCCACCACCAGCGGCACCATCCACTTCCAGGGCCAGGATCTGGCGGGCCGCAAGCCCTTCCAGATCACCCGTGGCGGCATCGCGCGCACCTTCCAGAACATCCGCATCTTCAAGGAGATGTCGCTGCTGGAGAACGTGACTGTCGGCATGGACGCCAAGCTGCGCTACGGCCCGCTGGGCCTGCTCGCGAGCACGGGCATGTTCCGCAGCGAGGAAAAGCGCGCCCGCGACCGTGCGCGCGAACTGCTGAGCTGGGTCAAGCTGGACCACAAGGCGAACGACGTGGCCGACAACCTCTCGTACGGCGACCAGCGCAAGCTGGAGCTCGCACGCGCGCTGGCCACCGAGCCGACGCTGCTGCTGCTGGACGAGCCGGTGGCCGGCATGAACAGCACCGAGAAGAGCGAGCTGATGGTCGAGATCGAGAACATCGCGGCGCGCGGCTTCACGGTCTTCATGATCGAGCACGACATGCGCTTCGTGATGGGCCTGTGCCAGCAGATCGCGGTGCTGAACTTCGGCCGCATCATCGCGCGCGGCGGCCCCGAGCAGATCCGCAACGACCCGCAGGTGATCGAGGCCTACCTCGGCCGCGAAGACGACGAAGCCACGAACGACCAGGAGACCGCGGCATGA
PROTEIN sequence
Length: 268
MSDNTLLTLKNVSRHFGGLKVLQDVNLDIPKGGIFGLIGPNGAGKTTVFNLITGLLPTTSGTIHFQGQDLAGRKPFQITRGGIARTFQNIRIFKEMSLLENVTVGMDAKLRYGPLGLLASTGMFRSEEKRARDRARELLSWVKLDHKANDVADNLSYGDQRKLELARALATEPTLLLLDEPVAGMNSTEKSELMVEIENIAARGFTVFMIEHDMRFVMGLCQQIAVLNFGRIIARGGPEQIRNDPQVIEAYLGREDDEATNDQETAA*